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13_1_20cm_4_scaffold_550

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_550_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3..611
DNA (609bp) protein (203aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
two-component response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
response regulator receiver
13_1_20cm_4_scaffold_550_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(608..796)
DNA (189bp) protein (63aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_550_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(804..2177)
DNA (1374bp) protein (458aa)
acetoacetate metabolism regulatory protein AtoC Tax=RBG_16_Gemmatimonadetes_66_8_curated
Fis family transcriptional regulator id=14430105 bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
13_1_20cm_4_scaffold_550_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2170..3072)
DNA (903bp) protein (301aa)
Diacylglycerol kinase catalytic region n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLF9_ROSCS
diacylglycerol kinase catalytic subunit; K07029 Tax=RBG_16_Gemmatimonadetes_66_8_curated
diacylglycerol kinase catalytic subunit
13_1_20cm_4_scaffold_550_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3075..7493)
DNA (4419bp) protein (1473aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT
hypothetical protein; K09800 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_550_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7493..9682)
DNA (2190bp) protein (730aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen; K07277 outer membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
surface antigen (D15)
13_1_20cm_4_scaffold_550_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9696..11297
DNA (1602bp) protein (534aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y9_GEMAT
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AHG90078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC-type transporter, periplasmic subunit
13_1_20cm_4_scaffold_550_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12184..13533
DNA (1350bp) protein (450aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG19_RHOMR
13_1_20cm_4_scaffold_550_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13670..14518)
DNA (849bp) protein (283aa)
putative oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
Ferredoxin--NADP reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
Ferredoxin--NADP reductase
13_1_20cm_4_scaffold_550_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14627..15136
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y6_GEMAT
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AHG90070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP/cobalamin adenosyltransferase
13_1_20cm_4_scaffold_550_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15133..16248
DNA (1116bp) protein (372aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=AROB_CAUCN
3-dehydroquinate synthase
13_1_20cm_4_scaffold_550_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16249..16419)
DNA (171bp) protein (57aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
13_1_20cm_4_scaffold_550_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16788..17681
DNA (894bp) protein (298aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
13_1_20cm_4_scaffold_550_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17812..18510
DNA (699bp) protein (233aa)
Peptidase S16, lon domain protein {ECO:0000313|EMBL:CDM66852.1}; EC=3.4.21.53 {ECO:0000313|EMBL:CDM66852.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;"
ATP-dependent protease La n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU6_9BACT
peptidase S16 lon domain protein
13_1_20cm_4_scaffold_550_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18534..19844
DNA (1311bp) protein (437aa)
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT
glcD; glycolate oxidase subunit GlcD
13_1_20cm_4_scaffold_550_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19841..21052
DNA (1212bp) protein (404aa)
Glycolate oxidase subunit n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NCA8_GLOVI
glcE; glycolate oxidase subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glcE; glycolate oxidase subunit
13_1_20cm_4_scaffold_550_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21062..22300
DNA (1239bp) protein (413aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auran
glcF; glycolate oxidase iron-sulfur subunit
13_1_20cm_4_scaffold_550_18
RLO_PLX_64_10, Bacteria

Not on your lists

22307..22987
DNA (681bp) protein (227aa)
putative beta-phosphoglucomutase (EC:5.4.2.6) Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
putative beta-phosphoglucomutase (EC:5.4.2.6)
Putative Beta-phosphoglucomutase id=1969952 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_550_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22984..24054
DNA (1071bp) protein (357aa)
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress n=1 Tax=Patulibacter medicamentivorans RepID=H0E4K7_9ACTN
putative aminomethyl transferase; K06980 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative aminomethyl transferase
13_1_20cm_4_scaffold_550_20
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

24051..25034
DNA (984bp) protein (328aa)
sterol-4-alpha-carboxylate 3-dehydrogenase (EC:1.1.1.170)
NAD-dependent epimerase/dehydratase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R600_ISOPI
nucleoside-diphosphate-sugar epimerase Tax=RBG_16_Chloroflexi_64_32_curated
13_1_20cm_4_scaffold_550_21
unknown

Not on your lists

comp(25070..25318)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_4_scaffold_550_22
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25376..28456
DNA (3081bp) protein (1027aa)
glycosyl hydrolases 38-like Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein id=16786537 bin=RBG_16_Aminicenantes_63_16_plus species=Alistipes sp. CAG:268 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM rbh
hypothetical protein
13_1_20cm_4_scaffold_550_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

28467..28883
DNA (417bp) protein (139aa)
chlI; magnesium chelatase subunit ChlI; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Mg-chelatase subunit ChlI n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC0_CHLTF
magnesium chelatase subunit ChlI
Displaying 23 items

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