ggKbase home page

13_1_20cm_4_scaffold_5846

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5846_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(47..691)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA76_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39674.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_5846_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(688..1158)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Y9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 domain protein
13_1_20cm_4_scaffold_5846_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1151..1690)
DNA (540bp) protein (180aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_5846_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1888..2364)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL3_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_5846_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2690..4147
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA95_GEMAT
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AHG91973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M14 carboxypeptidase A
13_1_20cm_4_scaffold_5846_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4137..5537
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036A9587
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AHG91973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M14 carboxypeptidase A
13_1_20cm_4_scaffold_5846_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6082..6444
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39809.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_5846_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6498..9446
DNA (2949bp) protein (983aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAK8_GEMAT rbh
Helicase, DEAD/DEAH family {ECO:0000313|EMBL:AHG91970.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
helicase, DEAD/DEAH family
13_1_20cm_4_scaffold_5846_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9308..9745)
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWG8_9CYAN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AHG91968.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
GCN5-related N-acetyltransferase
13_1_20cm_4_scaffold_5846_10
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9780..10538)
DNA (759bp) protein (253aa)
CTP synthase n=1 Tax=Klebsiella pneumoniae UCICRE 14 RepID=V3ENG4_KLEPN
Class I glutamine amidotransferase {ECO:0000313|EMBL:CDM99540.1}; TaxID=1463165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Kle
hypothetical protein
13_1_20cm_4_scaffold_5846_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10730..11398)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAK5_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91967.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF1470
13_1_20cm_4_scaffold_5846_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11539..12099
DNA (561bp) protein (187aa)
Probable non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemm
Probable non-canonical purine NTP phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAK4_GEMAT
hypothetical protein
13_1_20cm_4_scaffold_5846_13
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12108..12572)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PM34_9FIRM
LD-carboxypeptidase {ECO:0000313|EMBL:EUC77808.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35
peptidase S66
13_1_20cm_4_scaffold_5846_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(12656..13018)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LII8_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP11886.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_4_scaffold_5846_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13123..14313
DNA (1191bp) protein (397aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:BAH39800.1}; EC=1.17.1.2 {ECO:0000313|EMBL:BAH39800.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmat
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAK2_GEMAT rbh
13_1_20cm_4_scaffold_5846_16
unknown

Not on your lists

14388..15128
DNA (741bp) protein (247aa)

This feature has no annotations

13_1_20cm_4_scaffold_5846_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15125..16069
DNA (945bp) protein (315aa)
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=GWA2_Rokubacteria_70_23_curated
Putative Carbon monoxide dehydrogenase, accessory protein I id=3514168 bin=GWC2_Methylomirabilis_70_24 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Displaying 17 items

View Taxonomy