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13_1_20cm_4_scaffold_609

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_609_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..844)
DNA (843bp) protein (281aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
Putative hydrolase {ECO:0000313|EMBL:BAH37580.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
putative hydrolase
13_1_20cm_4_scaffold_609_2
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

866..2638
DNA (1773bp) protein (591aa)
ABC transporter, inner membrane subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG76_ANADE
ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABC83585.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
ABC transporter inner membrane subunit
13_1_20cm_4_scaffold_609_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2635..4902
DNA (2268bp) protein (756aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60171.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
aliphatic sulfonates ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_609_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4899..5567
DNA (669bp) protein (223aa)
Cobalt transport protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYV6_ROSS1
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative membrane protein
13_1_20cm_4_scaffold_609_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5564..6340
DNA (777bp) protein (259aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYV5_ROSS1
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_20cm_4_scaffold_609_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6331..8769
DNA (2439bp) protein (813aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI74_9ACTN
ABC transporter-like protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_20cm_4_scaffold_609_7
unknown

Not on your lists

comp(8782..9135)
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_4_scaffold_609_8
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(9152..10222)
DNA (1071bp) protein (357aa)
Peptidase M42 family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS
Peptidase M42 family protein {ECO:0000313|EMBL:ABU56365.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
peptidase M42 family protein
13_1_20cm_4_scaffold_609_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10219..11214)
DNA (996bp) protein (332aa)
hypothetical protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative uncharacterized protein id=2924369 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
hypothetical protein
13_1_20cm_4_scaffold_609_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11243..12091)
DNA (849bp) protein (283aa)
Periplasmic binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARA8_RUBXD
Periplasmic binding protein {ECO:0000313|EMBL:ABG06070.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Ru
periplasmic binding protein
13_1_20cm_4_scaffold_609_11
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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comp(12165..14336)
DNA (2172bp) protein (724aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAK9_SINAD
oligopeptide transporter Tax=RBG_16_Zixibacteria_50_21_curated
oligopeptide transporter
13_1_20cm_4_scaffold_609_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14589..16091
DNA (1503bp) protein (501aa)
putative serine/threonine protein kinase (EC:2.7.11.1) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
protein kinase
13_1_20cm_4_scaffold_609_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15982..17139)
DNA (1158bp) protein (386aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase class I and II
13_1_20cm_4_scaffold_609_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17152..18321)
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXQ0_9BACT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETX05175.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_609_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18318..18761)
DNA (444bp) protein (148aa)
Bll7145 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EE0_BRADU
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_609_16
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18758..20020)
DNA (1263bp) protein (421aa)
L-sorbosone dehydrogenase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4F9_NITHN
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ADE15143.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus haloph
L-sorbosone dehydrogenase
13_1_20cm_4_scaffold_609_17
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(20017..20913)
DNA (897bp) protein (299aa)
Band 7 protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTR7_9BACT
Band 7 protein {ECO:0000313|EMBL:EHO42684.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
13_1_20cm_4_scaffold_609_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(20915..21361)
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
putative membrane protein
hypothetical protein id=7718871 bin=BACIGN_2 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
13_1_20cm_4_scaffold_609_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21522..22598
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU0_GEMAT id=5223895 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:AHG92024.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF4098
13_1_20cm_4_scaffold_609_20
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22588..22974
DNA (387bp) protein (129aa)
RNA-binding S4 domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZ35_HALO1
RNA-binding S4 domain protein {ECO:0000313|EMBL:ACY14505.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Hali
RNA-binding S4 domain-containing protein
13_1_20cm_4_scaffold_609_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22958..23437)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BFN8_MEISD
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_609_22
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23434..24123)
DNA (690bp) protein (230aa)
Putative membrane associated protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0STG7_PLABD
Putative membrane associated protein {ECO:0000313|EMBL:ADY60429.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubini
membrane associated protein
13_1_20cm_4_scaffold_609_23
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24166..25506)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B545DF
Uncharacterized protein {ECO:0000313|EMBL:AII53166.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein
13_1_20cm_4_scaffold_609_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25503..26837)
DNA (1335bp) protein (445aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid permease
Displaying 24 items

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