ggKbase home page

13_1_20cm_4_scaffold_6243

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_6243_1
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..586)
DNA (585bp) protein (195aa)
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EXI68879.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulib
13_1_20cm_4_scaffold_6243_2
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

685..972
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JT41_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR70659.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
protein of unknown function DUF1330
13_1_20cm_4_scaffold_6243_3
unknown

Not on your lists

comp(977..1198)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_4_scaffold_6243_4
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1555..2214
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GF0_BURXL
Uncharacterized protein {ECO:0000313|EMBL:ABE36839.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
carboxymuconolactone decarboxylase family protein
13_1_20cm_4_scaffold_6243_5
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2214..2600
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KNF3_9SYNC
Membrane protein {ECO:0000313|EMBL:AIZ62605.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
membrane protein
13_1_20cm_4_scaffold_6243_6
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2601..3479)
DNA (879bp) protein (293aa)
PHP domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7C6_METSW
PHP domain protein {ECO:0000313|EMBL:AEG17068.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium p
PHP domain-containing protein
13_1_20cm_4_scaffold_6243_7
unknown

Not on your lists

comp(3476..4054)
DNA (579bp) protein (193aa)

This feature has no annotations

13_1_20cm_4_scaffold_6243_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4121..4531
DNA (411bp) protein (137aa)
ACT domain-containing protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTP6_ACIC1
ACT domain-containing protein {ECO:0000313|EMBL:ABK52806.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strai
ACT domain-containing protein
13_1_20cm_4_scaffold_6243_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4538..4843)
DNA (306bp) protein (102aa)
Putative integron gene cassette protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08XJ7_STIAD
Putative integron gene cassette protein {ECO:0000313|EMBL:ADO70548.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU65204.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxoc
integron gene cassette protein
13_1_20cm_4_scaffold_6243_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4978..5517
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HI63_ANADF
Uncharacterized protein {ECO:0000313|EMBL:ABS28409.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
13_1_20cm_4_scaffold_6243_11
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5522..6100
DNA (579bp) protein (193aa)
Arabinose efflux permease family protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C063_DESTA
arabinose efflux permease family protein Tax=RBG_16_Desulfobacca_60_12_curated
arabinose efflux permease family protein
13_1_20cm_4_scaffold_6243_12
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6097..6546
DNA (450bp) protein (150aa)
Arabinose efflux permease family protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C063_DESTA
arabinose efflux permease family protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
arabinose efflux permease family protein
13_1_20cm_4_scaffold_6243_13
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6627..8084
DNA (1458bp) protein (486aa)
Extracellular repeat protein, HAF family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M897_GEODF
HAF repeat protein {ECO:0000313|EMBL:ACM20363.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (stra
extracellular repeat-containing protein, HAF family
13_1_20cm_4_scaffold_6243_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8091..9077)
DNA (987bp) protein (329aa)
Aldo/keto reductase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6D4_SORCE
Oxidoreductase {ECO:0000313|EMBL:EYF01718.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apic
aldo/keto reductase
13_1_20cm_4_scaffold_6243_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9246..11027
DNA (1782bp) protein (594aa)
pyruvate ferredoxin oxidoreductase, alpha chain (EC:1.2.7.1); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
pyruvate ferredoxin oxidoreductase, alpha chain (EC:1.2.7.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000378B61D
13_1_20cm_4_scaffold_6243_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11042..11851
DNA (810bp) protein (270aa)
2-oxoacid:ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003653468
2-oxoacid:ferredoxin oxidoreductase subunit beta
13_1_20cm_4_scaffold_6243_17
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11887..12330
DNA (444bp) protein (148aa)
putative Thioesterase/thiol ester dehydrase-isomerase (EC:3.1.2.-)
Thioesterase n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S052_9RALS
Thioesterase {ECO:0000313|EMBL:EPX97888.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
13_1_20cm_4_scaffold_6243_18
unknown

Not on your lists

comp(12323..12985)
DNA (663bp) protein (221aa)

This feature has no annotations

Displaying 18 items

View Taxonomy