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13_1_20cm_4_scaffold_629

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_629_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E8_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_20cm_4_scaffold_629_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(223..1221)
DNA (999bp) protein (333aa)
polyprenyl synthase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Polyprenyl synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4E9_GEMAT
polyprenyl synthase
13_1_20cm_4_scaffold_629_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1223..3496)
DNA (2274bp) protein (758aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_629_4
unknown

Not on your lists

3717..4826
DNA (1110bp) protein (370aa)

This feature has no annotations

13_1_20cm_4_scaffold_629_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4757..5836)
DNA (1080bp) protein (360aa)
hutU; urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hutU; urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F3_GEMAT
13_1_20cm_4_scaffold_629_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6275..7765)
DNA (1491bp) protein (497aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
Histidine ammonia-lyase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F4I3_ACIC5
Histidine ammonia-lyase
13_1_20cm_4_scaffold_629_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7862..8743)
DNA (882bp) protein (294aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_629_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8875..12390)
DNA (3516bp) protein (1172aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_629_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12408..13211)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide repeat-containing protein
13_1_20cm_4_scaffold_629_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13215..13832)
DNA (618bp) protein (206aa)
Putative peptidoglycan-associated lipoprotein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F8_GEMAT
pal; putative peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pal; putative peptidoglycan-associated lipoprotein
13_1_20cm_4_scaffold_629_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13855..15243)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F9_GEMAT
hypothetical protein; K03641 TolB protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
WD40-like beta Propeller containing protein
13_1_20cm_4_scaffold_629_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15243..15926)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G0_GEMAT
Putative periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_629_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15923..16357)
DNA (435bp) protein (145aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G1_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative biopolymer transport protein
13_1_20cm_4_scaffold_629_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16359..17000)
DNA (642bp) protein (214aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G2_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_1_20cm_4_scaffold_629_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16946..17932)
DNA (987bp) protein (329aa)
UDP-glucose-4-epimerase Tax=GWC2_RIF_CHLX_73_18_curated
UDP-glucose 4-epimerase id=4952052 bin=GWC2_Chloroflexi_73_18 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
galE: UDP-glucose 4-epimerase GalE
13_1_20cm_4_scaffold_629_16
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17929..19191)
DNA (1263bp) protein (421aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3J0_9FIRM
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_20cm_4_scaffold_629_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19199..19993)
DNA (795bp) protein (265aa)
cytochrome c biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cytochrome c assembly protein id=3366873 bin=GWC2_Methylomirabilis_70_16 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ResC/HemX-like cytochrome c biogenesis membrane protein
13_1_20cm_4_scaffold_629_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20035..21291)
DNA (1257bp) protein (419aa)
LysM domain-containing protein id=7200269 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
peptidoglycan-binding LysM
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_629_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21263..21748)
DNA (486bp) protein (162aa)
Single-stranded DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G5_GEMAT
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ssb; single-strand binding protein
13_1_20cm_4_scaffold_629_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21851..22201)
DNA (351bp) protein (117aa)
Ribosomal-protein-alanine acetyltransferase n=10 Tax=Clostridium RepID=G5I7P5_9CLOT
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AHG91095.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribosomal-protein-alanine acetyltransferase
13_1_20cm_4_scaffold_629_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22275..23015)
DNA (741bp) protein (247aa)
tRNA threonylcarbamoyl adenosine modification protein YeaZ n=1 Tax=Selenomonas sp. CM52 RepID=J6I0Y9_9FIRM
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
universal protein YeaZ
13_1_20cm_4_scaffold_629_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23015..25258)
DNA (2244bp) protein (748aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
UvrABC system protein B {ECO:0000255|HAMAP-Rule:MF_00204}; Short=Protein UvrB {ECO:0000255|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000255|HAMAP-Rule:MF_00204}; TaxID=379066 species="Ba
uvrB; UvrABC system protein B
Displaying 22 items

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