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13_1_20cm_4_scaffold_642

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_642_1
unknown

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_4_scaffold_642_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(459..896)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein id=24464457 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_20cm_4_scaffold_642_3
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(900..1298)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034B77DA
Uncharacterized protein {ECO:0000313|EMBL:CAM00777.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (
hypothetical protein
13_1_20cm_4_scaffold_642_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(1351..3363)
DNA (2013bp) protein (671aa)
LuxR family transcriptional regulator Tax=CSP1_4_Chloroflexi
LuxR family transcriptional regulator id=14629251 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_642_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3387..3845)
DNA (459bp) protein (153aa)
adenylate cyclase (EC:4.6.1.1)
LuxR family transcriptional regulator Tax=GWC2_RIF_CHLX_73_18_curated
Adenylate/guanylate cyclase id=3293340 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_20cm_4_scaffold_642_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3842..5287)
DNA (1446bp) protein (482aa)
FAD-dependent oxidoreductase domain-containing 2 Tax=GWC2_RIF_CHLX_73_18_curated
FAD-dependent oxidoreductase domain containing 2 id=3293335 bin=GWC2_Chloroflexi_73_18 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_642_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5350..5769)
DNA (420bp) protein (140aa)
putative transcriptional regulator, Crp/Fnr family Tax=RBG_16_RIF_CHLX_69_14_curated
Cyclic nucleotide-binding protein id=3293334 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
cyclic nucleotide-binding protein
13_1_20cm_4_scaffold_642_8
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5770..6033)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZB0_PSEUX
hypothetical protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
hypothetical protein
13_1_20cm_4_scaffold_642_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6204..8204)
DNA (2001bp) protein (667aa)
acyl-peptide hydrolase (EC:3.4.19.1) Tax=GWC2_RIF_CHLX_73_18_curated
Acylamino-acid-releasing enzyme (Ec) (Acyl-peptide hydrolase) (Aph) id=4137281 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_20cm_4_scaffold_642_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8243..9643
DNA (1401bp) protein (467aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6K1_9CHLR rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH80612.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter
major facilitator transporter
13_1_20cm_4_scaffold_642_11
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10839..11684)
DNA (846bp) protein (282aa)
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJK55418.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1247227 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rpoE; RNA polymerase sigma-70 factor, ECF subfamily
13_1_20cm_4_scaffold_642_12
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

11762..12157
DNA (396bp) protein (132aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=H5RTH5_9NOCA id=1247228 bin=RBG9 species=Nocardia brasiliensis genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_642_13
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12105..13037)
DNA (933bp) protein (311aa)
Transcriptional regulator, MarR family with acetyltransferase activity n=1 Tax=Burkholderia sp. YI23 RepID=G8MD82_9BURK
Transcriptional regulator, MarR family with acetyltransferase activity {ECO:0000313|EMBL:AET91944.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderia
marR; MarR family transcriptional regulator
13_1_20cm_4_scaffold_642_14
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13092..13511)
DNA (420bp) protein (140aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V349_9MICC
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMY34429.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_642_15
unknown

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comp(13618..14688)
DNA (1071bp) protein (357aa)

This feature has no annotations

13_1_20cm_4_scaffold_642_16
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14909..15547
DNA (639bp) protein (213aa)
type 11 methyltransferase n=1 Tax=Ochrobactrum anthropi RepID=UPI000287DFEC
Methyltransferase type 11 {ECO:0000313|EMBL:KDP76056.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source=
type 12 methyltransferase
13_1_20cm_4_scaffold_642_17
unknown

Not on your lists

comp(15549..16043)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_20cm_4_scaffold_642_18
unknown

Not on your lists

comp(16040..16552)
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_20cm_4_scaffold_642_19
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16639..18435
DNA (1797bp) protein (599aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI0003616074
ATP-dependent DNA helicase {ECO:0000313|EMBL:EXX92468.1}; TaxID=1380763 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
ATP-dependent DNA helicase
13_1_20cm_4_scaffold_642_20
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18720..19220)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0003697426
hypothetical protein Tax=RBG_16_Actinobacteria_70_17_curated
hypothetical protein
13_1_20cm_4_scaffold_642_21
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(19264..19806)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V3L5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIE85423.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
hypothetical protein
13_1_20cm_4_scaffold_642_22
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

19928..20344
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIE5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84457.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
cupin 2
13_1_20cm_4_scaffold_642_23
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20347..21399
DNA (1053bp) protein (351aa)
Alcohol dehydrogenase, zinc-containing n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XNE4_9ACTO
IMP dehydrogenase {ECO:0000313|EMBL:KEP24358.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
alcohol dehydrogenase GroES domain-containing protein
13_1_20cm_4_scaffold_642_24
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

21396..21782
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AS30_STRRD
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
hypothetical protein
13_1_20cm_4_scaffold_642_25
unknown

Not on your lists

21913..22029
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 25 items

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