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13_1_20cm_4_scaffold_644

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_644_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..545)
DNA (543bp) protein (181aa)
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aldehyde Dehydrogenase
13_1_20cm_4_scaffold_644_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(545..1030)
DNA (486bp) protein (162aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_20cm_4_scaffold_644_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1030..2289)
DNA (1260bp) protein (420aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
putative NtrC family two-component response regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
sigma-54 factor interaction domain-containing protein
13_1_20cm_4_scaffold_644_4
unknown

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comp(2286..2951)
DNA (666bp) protein (222aa)

This feature has no annotations

13_1_20cm_4_scaffold_644_5
unknown

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comp(2935..3252)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_4_scaffold_644_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3357..4148)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SUC4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHG90451.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Conserved hypothetical protein CHP00268
13_1_20cm_4_scaffold_644_7
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4277..4756
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P479_9BACT
AsnC family transcriptional regulator {ECO:0000313|EMBL:KEI44925.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspor
AsnC family transcriptional regulator
13_1_20cm_4_scaffold_644_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4756..5727
DNA (972bp) protein (324aa)
DMT superfamily drug/metabolite permease Tax=RBG_16_Deltaproteobacteria_54_11_curated
protein of unknown function DUF6 transmembrane
ial:IALB_2604 DMT superfamily drug/metabolite permease id=719043 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
13_1_20cm_4_scaffold_644_9
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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5780..6145
DNA (366bp) protein (122aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VC87_9DELT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EPR44289.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" so
conserved protein of unknown function
13_1_20cm_4_scaffold_644_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6111..6461
DNA (351bp) protein (117aa)
ycdJ; arylesterase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
antibiotic biosynthesis monooxygenase id=1245775 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
antibiotic biosynthesis monooxygenase
13_1_20cm_4_scaffold_644_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

6529..7902
DNA (1374bp) protein (458aa)
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:AIE84362.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbrii
aromatic-L-amino-acid decarboxylase
Aromatic-L-amino-acid decarboxylase id=2122836 bin=GWB2_Chloroflexi_54_36 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
13_1_20cm_4_scaffold_644_12
CG_OP9-01, Atribacteria, Bacteria

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comp(7906..8691)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035CE211
transporter, MscS family Tax=CG_OP9-01
mechanosensitive ion channel protein MscS
13_1_20cm_4_scaffold_644_13
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

8722..10731
DNA (2010bp) protein (670aa)
sodium/hydrogen exchanger family/TrkA domain protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=CG_Nitrosp_02
Sodium/hydrogen exchanger family/TrkA domain protein id=3240920 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Kef-type K+ transport system NAD-binding protein
13_1_20cm_4_scaffold_644_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10738..11088)
DNA (351bp) protein (117aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_644_15
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(11392..12927)
DNA (1536bp) protein (512aa)
Putative chaperone; K07391 magnesium chelatase family protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
Putative chaperone; K07391 magnesium chelatase family protein id=7202493 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
comM; competence ATPase ComM
13_1_20cm_4_scaffold_644_16
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13008..14150
DNA (1143bp) protein (381aa)
Efflux pump, RND family, membrane fusion lipoprotein n=2 Tax=Geobacter metallireducens RepID=Q39V42_GEOMG
Efflux pump, RND family, membrane fusion lipoprotein {ECO:0000313|EMBL:ABB31882.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;
RND family efflux pump membrane fusion lipoprotein
13_1_20cm_4_scaffold_644_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14147..17233
DNA (3087bp) protein (1029aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RBG_16_Deltaproteobacteria_54_11_curated
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14623092 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
acriflavin resistance protein
13_1_20cm_4_scaffold_644_18
unknown

Not on your lists

comp(17243..18730)
DNA (1488bp) protein (496aa)

This feature has no annotations

13_1_20cm_4_scaffold_644_19
unknown

Not on your lists

comp(18732..19271)
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_20cm_4_scaffold_644_20
unknown

Not on your lists

comp(19470..20132)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_20cm_4_scaffold_644_21
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20262..20600
DNA (339bp) protein (113aa)
Chaperonin csaA n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NYJ3_9RHOB
Chaperonin csaA {ECO:0000313|EMBL:EAV42189.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain
export-related chaperone CsaA
13_1_20cm_4_scaffold_644_22
unknown

Not on your lists

comp(20527..21480)
DNA (954bp) protein (318aa)

This feature has no annotations

13_1_20cm_4_scaffold_644_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21446..22630)
DNA (1185bp) protein (395aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=14628995 bin=bin8_Chloro species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_20cm_4_scaffold_644_24
unknown

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comp(22702..23244)
DNA (543bp) protein (181aa)

This feature has no annotations

Displaying 24 items

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