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13_1_20cm_4_scaffold_7064

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_7064_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..502)
DNA (501bp) protein (167aa)
abhydrolase 1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4748154 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alpha/beta hydrolase
13_1_20cm_4_scaffold_7064_2
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(544..1308)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q143V9_BURXL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein
13_1_20cm_4_scaffold_7064_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1610..2062)
DNA (453bp) protein (151aa)
Large-conductance mechanosensitive channel n=2 Tax=Geobacter sulfurreducens RepID=MSCL_GEOSL
mscL; large-conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel Tax=RBG_16_Armatimonadetes_67_12_curated
mechanosensitive ion channel protein MscL
13_1_20cm_4_scaffold_7064_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2074..2745)
DNA (672bp) protein (224aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=CSP1_6_Rokubacteria
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=14626949 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxymethylenebutenolidase (EC:3.1.1.45)
13_1_20cm_4_scaffold_7064_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3340..3747
DNA (408bp) protein (136aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWA2_Rokubacteria_73_35_curated
Uroporphyrinogen decarboxylase (URO-D) id=2312843 bin=GWA2_Methylomirabilis_73_35 species=Methanococcus aeolicus genus=Methanococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_7064_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3850..5130
DNA (1281bp) protein (427aa)
ABC transporter substrate-binding protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000364AF7E
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
extracellular ligand-binding receptor
13_1_20cm_4_scaffold_7064_7
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

5144..6019
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T0Q4_9BRAD
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_NC10_65_8_curated
inner-membrane translocator
13_1_20cm_4_scaffold_7064_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6016..6741
DNA (726bp) protein (242aa)
ABC transporter-like protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUX2_9BURK
ABC transporter-like protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
13_1_20cm_4_scaffold_7064_9
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(6728..7486)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AF05_9BACT
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
13_1_20cm_4_scaffold_7064_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

7697..8233
DNA (537bp) protein (179aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_NC10_65_8_curated
ABC transporter id=2751013 bin=GWC2_Methylomirabilis_70_16 species=Bacillus alcalophilus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter-like protein
13_1_20cm_4_scaffold_7064_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8257..8529
DNA (273bp) protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_4_scaffold_7064_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8533..9453
DNA (921bp) protein (307aa)
alcohol dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Alcohol dehydrogenase id=3732189 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_1_20cm_4_scaffold_7064_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9456..10175
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B54EA1
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_7064_14
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

10411..11127
DNA (717bp) protein (239aa)
Putative PAPS reductase n=1 Tax=uncultured crenarchaeote RepID=Q702F7_9CREN
PAPS reductase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
13_1_20cm_4_scaffold_7064_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11201..11692)
DNA (492bp) protein (164aa)
metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626251 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_7064_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11694..12179)
DNA (486bp) protein (162aa)
leuD; alpha-IPM isomerase; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-isopropylmalate dehydratase small subunit id=2937751 bin=GWC2_Methylomirabilis_70_16 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
leuD; 3-isopropylmalate dehydratase small subunit
13_1_20cm_4_scaffold_7064_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12134..13558)
DNA (1425bp) protein (475aa)
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit id=2642973 bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_7064_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13694..14041
DNA (348bp) protein (116aa)
putative Endoribonuclease L-PSP Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
COG0251: Putative translation initiation inhibitor, yjgF family id=2937744 bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_7064_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14062..15249
DNA (1188bp) protein (396aa)
putative acyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Acetyl-CoA C-acetyltransferase id=4599720 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
putative acyl-CoA thiolase
13_1_20cm_4_scaffold_7064_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15270..15518
DNA (249bp) protein (83aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=2247854 bin=GWA2_Methylomirabilis_73_35 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_7064_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15528..16571)
DNA (1044bp) protein (348aa)
aminoglycoside phosphotransferase; K06979 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminoglycoside phosphotransferase id=4923991 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
aminoglycoside phosphotransferase
13_1_20cm_4_scaffold_7064_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(16625..17062)
DNA (438bp) protein (146aa)
Putative TonB-dependent siderophore receptor n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT6_9BACT
Putative TonB-dependent siderophore receptor {ECO:0000313|EMBL:CBE67219.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis
TonB-dependent siderophore receptor
Displaying 22 items

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