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13_1_20cm_4_scaffold_7429

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_7429_1

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comp(3..617)
DNA (615bp) protein (205aa)
DEAD/DEAH box helicase; K03726 helicase [EC:3.6.4.-] id=14427531 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Uncharacterized protein {ECO:0000313|EMBL:KKM68938.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DEAD/DEAH box helicase
13_1_20cm_4_scaffold_7429_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(614..2560)
DNA (1947bp) protein (649aa)
MCM family protein Tax=CSP1_1_Thaumarchaeota
MCM family protein id=14427532 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
MCM family protein
13_1_20cm_4_scaffold_7429_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2560..3090)
DNA (531bp) protein (177aa)
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein id=14427533 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
GINS complex protein
13_1_20cm_4_scaffold_7429_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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3209..4147
DNA (939bp) protein (313aa)
Replication factor C small subunit n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARU2_9ARCH rbh
Replication factor C small subunit {ECO:0000313|EMBL:CDI05128.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
rfcS; Replication factor C small subunit
13_1_20cm_4_scaffold_7429_trna_2
unknown

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comp(4151..4234)
DNA (84bp)
transferRNA
13_1_20cm_4_scaffold_7429_5
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4371..4772)
DNA (402bp) protein (134aa)
4Fe-4S ferredoxin n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B870_9ARCH
4Fe-4S ferredoxin {ECO:0000313|EMBL:AFS80676.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.
4Fe-4S ferredoxin
13_1_20cm_4_scaffold_7429_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4824..5270)
DNA (447bp) protein (149aa)
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKJ0_NITGG
Putative 4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AIC16189.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitr
putative 4Fe-4S ferredoxin iron-sulfur binding domain protein
13_1_20cm_4_scaffold_7429_7

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5349..6020
DNA (672bp) protein (224aa)
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1456151 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncu
translation initiation factor; K03264 translation initiation factor 6 id=14427536 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
translation initiation factor
13_1_20cm_4_scaffold_7429_8

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comp(6004..7260)
DNA (1257bp) protein (419aa)
Histidyl-tRNA synthetase (HARS, hisS) {ECO:0000313|EMBL:AIF14734.1}; EC=6.1.1.21 {ECO:0000313|EMBL:AIF14734.1};; TaxID=1456239 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncult
Putative tRNA synthetase class II core domain (G, H, P, S and T) n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARH7_9ARCH rbh
histidyl-tRNA synthetase
13_1_20cm_4_scaffold_7429_9

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7393..7809
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=3 Tax=environmental samples RepID=B3T460_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AIF07546.1}; TaxID=1456098 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_204_F10.;"
archease protein family
13_1_20cm_4_scaffold_7429_10
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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7849..8049
DNA (201bp) protein (67aa)
Thioredoxin n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A2Z8_NITMS
Thioredoxin {ECO:0000313|EMBL:AJW71705.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
Thioredoxin
13_1_20cm_4_scaffold_7429_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8111..9892)
DNA (1782bp) protein (594aa)
translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CSP1_1_Thaumarchaeota
translation initiation factor IF-2; K03243 translation initiation factor 5B id=14427552 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
infB; putative translation initiation factor IF-2
13_1_20cm_4_scaffold_7429_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9899..10300)
DNA (402bp) protein (134aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=CSP1_1_Thaumarchaeota
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=14427553 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ndk; nucleoside pyrophosphate kinase (EC:2.7.4.6)
13_1_20cm_4_scaffold_7429_13

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comp(10512..10718)
DNA (207bp) protein (69aa)
30S ribosomal protein S28e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IIL4_NITGG
Uncharacterized protein {ECO:0000313|EMBL:KKL52876.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rps28e; 30S ribosomal protein S28e
13_1_20cm_4_scaffold_7429_14

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comp(10715..11101)
DNA (387bp) protein (129aa)
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1502290 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Mari
rpl7ae; 50S ribosomal protein L7Ae id=14427556 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl7ae; 50S ribosomal protein L7Ae
13_1_20cm_4_scaffold_7429_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11162..12550)
DNA (1389bp) protein (463aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=CSP1_1_Thaumarchaeota
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] id=14427557 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
phosphoglucosamine mutase (EC:5.4.2.10)
13_1_20cm_4_scaffold_7429_trna_1
unknown

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12558..12642
DNA (85bp)
transferRNA
13_1_20cm_4_scaffold_7429_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12644..12829)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICX0_NITGG
Uncharacterized protein {ECO:0000313|EMBL:AFU59206.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein
13_1_20cm_4_scaffold_7429_17
unknown

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13040..13462
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_20cm_4_scaffold_7429_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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13609..14466
DNA (858bp) protein (286aa)
Formyl transferase domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR95_9ARCH rbh
Formyl transferase domain protein {ECO:0000313|EMBL:CDI05104.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
formyl transferase domain-containing protein
13_1_20cm_4_scaffold_7429_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14463..15161
DNA (699bp) protein (233aa)
creatininase Tax=CSP1_1_Thaumarchaeota
creatininase id=14427559 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Creatininase
Displaying 21 items

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