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13_1_20cm_4_scaffold_754

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_754_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(1..1131)
DNA (1131bp) protein (377aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003630E41
DNA primase small subunit
13_1_20cm_4_scaffold_754_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(1118..2170)
DNA (1053bp) protein (351aa)
priB; DNA primase, large subunit; K02685 DNA primase large subunit [EC:2.7.7.-] Tax=RBG_16_Archaea_50_20_curated
DNA primase large subunit PriL n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I855_METCZ
priB; DNA primase, large subunit
13_1_20cm_4_scaffold_754_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(2180..2920)
DNA (741bp) protein (247aa)
DNA polymerase sliding clamp n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BDW4_9ARCH
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen Tax=RBG_16_Archaea_50_20_curated
pcn; proliferating cell nuclear antigen
13_1_20cm_4_scaffold_754_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(3000..3323)
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPL5_THELI
DNA-directed RNA polymerase subunit M Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase subunit M
13_1_20cm_4_scaffold_754_5
unknown

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comp(3361..3660)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_20cm_4_scaffold_754_6
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(3762..4127)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHE5_PYRYC
Uncharacterized protein {ECO:0000313|EMBL:AHL21957.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
hypothetical protein
13_1_20cm_4_scaffold_754_7
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4164..4697)
DNA (534bp) protein (178aa)
Pyrophosphatase PpaX n=1 Tax=Candidatus Arthromitus sp. SFB-rat-Yit RepID=G2IEK1_9CLOT
Pyrophosphatase PpaX {ECO:0000313|EMBL:GAK07250.1}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
ppaX; pyrophosphatase PpaX
13_1_20cm_4_scaffold_754_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(4851..5138)
DNA (288bp) protein (96aa)
RNA polymerase dimerization; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA-directed RNA polymerase subunit L n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJJ8_THEBM
DNA-directed RNA polymerase subunit L
13_1_20cm_4_scaffold_754_9
RBG_16_Archaea_50_20_curated, Archaea

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comp(5135..5713)
DNA (579bp) protein (193aa)
RNA-binding protein, containing S1 domain n=2 Tax=Methanosarcina mazei RepID=M1QJY3_METMZ
RNA binding protein; K07573 exosome complex component CSL4 Tax=RBG_16_Archaea_50_20_curated
exosome complex RNA-binding protein Csl4
13_1_20cm_4_scaffold_754_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5710..6669)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RZ05_THEPD rbh
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_20cm_4_scaffold_754_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(6674..7213)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z8H2_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_4_scaffold_754_12

Not on your lists

7487..8482
DNA (996bp) protein (332aa)
High-affinity nickel-transporter n=1 Tax=mine drainage metagenome RepID=T1D5S9_9ZZZZ
High-affinity nickel-transporter {ECO:0000313|EMBL:EQD76844.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
high-affinity nickel-transporter
13_1_20cm_4_scaffold_754_13
unknown

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8553..8933
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_20cm_4_scaffold_754_14
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8997..9395)
DNA (399bp) protein (133aa)
Putative oxidoreductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=RBG_16_Ignavibacteria_34_14_curated
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E729_METEZ
13_1_20cm_4_scaffold_754_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(9786..10232)
DNA (447bp) protein (149aa)
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=RBG_16_Chloroflexi_68_14_curated
13_1_20cm_4_scaffold_754_16
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(10277..10843)
DNA (567bp) protein (189aa)
Metallo-beta-lactamase family protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N315_9ARCH
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:BAJ46721.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarc
beta-lactamase domain protein
13_1_20cm_4_scaffold_754_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11147..12634
DNA (1488bp) protein (496aa)
Pseudomonalisin {ECO:0000313|EMBL:KJL30718.1}; EC=3.4.21.100 {ECO:0000313|EMBL:KJL30718.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003702B8D
hypothetical protein
13_1_20cm_4_scaffold_754_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12744..14033)
DNA (1290bp) protein (430aa)
NHL repeat containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKB4_METPE
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_41_19_curated
NHL repeat containing protein
Displaying 18 items

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