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13_1_20cm_4_scaffold_8181

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_8181_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..181
DNA (180bp) protein (60aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_8181_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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178..999
DNA (822bp) protein (274aa)
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] id=7201336 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal {ECO:0000313|EMBL:AHG90599.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal
13_1_20cm_4_scaffold_8181_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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996..1493
DNA (498bp) protein (166aa)
cheD; chemotaxis protein CheD; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein CheD (EC:3.5.1.44)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00037C4637
13_1_20cm_4_scaffold_8181_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1610..2434
DNA (825bp) protein (275aa)
chemotaxis-specific methylesterase; K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=GWC2_Gemmatimonadetes_71_10_curated
cheB; chemotaxis response regulator protein-glutamate methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A896_GEMAT
13_1_20cm_4_scaffold_8181_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2431..2844
DNA (414bp) protein (138aa)
Chemotaxis protein cheW n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S195_9BRAD
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_8181_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2841..3344
DNA (504bp) protein (168aa)
chemotaxis protein CheW n=1 Tax=Desulfovibrio longus RepID=UPI0003B631B4
cheW2; chemotaxis protein Chew Tax=GWC2_Gemmatimonadetes_71_10_curated
cheW; Chemotaxis protein CheW
13_1_20cm_4_scaffold_8181_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3344..4210
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A898_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_8181_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4273..5070
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A899_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_8181_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5105..5290
DNA (186bp) protein (62aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_8181_trna_1
unknown

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5304..5377
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_8181_10
unknown

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comp(5323..5586)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_4_scaffold_8181_11
unknown

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comp(5599..5877)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_20cm_4_scaffold_8181_12
unknown

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6096..7016
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_20cm_4_scaffold_8181_trna_2
unknown

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7042..7115
DNA (74bp)
transferRNA
13_1_20cm_4_scaffold_8181_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7066..8022
DNA (957bp) protein (319aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000255|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000255|HAMAP-Rule:MF_0100
mraW; putative S-adenosyl-methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSMH_GEMAT
13_1_20cm_4_scaffold_8181_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8027..8314
DNA (288bp) protein (96aa)
Cell division protein FtsL family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_8181_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8317..10263
DNA (1947bp) protein (649aa)
ftsI; cell division protein FtsI (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=GWC2_Gemmatimonadetes_71_10_curated
Cell division protein FtsI n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A4_GEMAT
penicillin-binding protein transpeptidase
13_1_20cm_4_scaffold_8181_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10260..10871
DNA (612bp) protein (204aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A5_GEMAT
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
Displaying 18 items

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