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13_1_20cm_4_scaffold_8260

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_8260_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..780)
DNA (780bp) protein (260aa)
tricarballylate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein id=5011106 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tricarballylate dehydrogenase
13_1_20cm_4_scaffold_8260_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(777..1097)
DNA (321bp) protein (107aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Ethyl tert-butyl ether degradation EthD id=5011107 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ethyl tert-butyl ether degradation EthD
13_1_20cm_4_scaffold_8260_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1166..1873)
DNA (708bp) protein (236aa)
metallophosphoesterase Tax=GWA2_Rokubacteria_70_23_curated
metallophosphoesterase id=24460619 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
metallophosphoesterase
13_1_20cm_4_scaffold_8260_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2756..3433
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNC9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEV98831.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
hypothetical protein
13_1_20cm_4_scaffold_8260_5
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3437..4231
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGI1_GEOBB
hypothetical protein Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
hypothetical protein
13_1_20cm_4_scaffold_8260_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4123..4890)
DNA (768bp) protein (256aa)
hypothetical protein; K07226 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=5011110 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_8260_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4887..6029)
DNA (1143bp) protein (381aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3875404 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_8260_8
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

6733..7461
DNA (729bp) protein (243aa)
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
Putative uncharacterized protein id=2026322 bin=GWD2_Chloroflexi_49_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_20cm_4_scaffold_8260_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7489..8544
DNA (1056bp) protein (352aa)
extradiol ring-cleavage dioxygenase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628CAC rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX06511.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_20cm_4_scaffold_8260_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8541..10766
DNA (2226bp) protein (742aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7663B
Uncharacterized protein {ECO:0000313|EMBL:ETX02939.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Rieske (2Fe-2S) domain-containing protein
13_1_20cm_4_scaffold_8260_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10759..11877)
DNA (1119bp) protein (373aa)
ABC-type Fe3+ transport system periplasmic component; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC-type Fe3+ transport system periplasmic component id=1956466 bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC-type Fe3+ transport system periplasmic component
13_1_20cm_4_scaffold_8260_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11920..13065
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRC5_SORCE
Uncharacterized protein {ECO:0000313|EMBL:ETX04623.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_20cm_4_scaffold_8260_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13079..14122
DNA (1044bp) protein (348aa)
Putrescine transport ATP-binding protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC transporter ATP-binding protein id=2142598 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Caldiarchaeum subterraneum genus=Candidatus Caldiarchaeum taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter-like protein
13_1_20cm_4_scaffold_8260_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14119..15783
DNA (1665bp) protein (555aa)
ABC-type Fe3+ transport system permease component; K02011 iron(III) transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ABC-type Fe3+ transport system permease component id=2117334 bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
ABC-type Fe3+ transport system permease component
13_1_20cm_4_scaffold_8260_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15788..16555
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZVA2_THETH
Uncharacterized protein {ECO:0000313|EMBL:ETW93708.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
13_1_20cm_4_scaffold_8260_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16572..17786)
DNA (1215bp) protein (405aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=3875409 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Displaying 16 items

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