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13_1_20cm_4_scaffold_926

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_926_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3..518
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_926_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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515..1753
DNA (1239bp) protein (413aa)
DNA mismatch repair protein MutL n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=MUTL_GEMAT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA mismatch repair protein mutL
13_1_20cm_4_scaffold_926_3
unknown

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comp(1659..2099)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_20cm_4_scaffold_926_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2137..3051
DNA (915bp) protein (305aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWC2_Gemmatimonadetes_71_10_curated
tRNA dimethylallyltransferase
tRNA dimethylallyltransferase id=4853966 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_926_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3048..4178
DNA (1131bp) protein (377aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L4_GEMAT
13_1_20cm_4_scaffold_926_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4178..4723
DNA (546bp) protein (182aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLE5_THEBM
4-hydroxybenzoate polyprenyltransferase-related prenyltransferase
13_1_20cm_4_scaffold_926_7
unknown

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4666..4860
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_4_scaffold_926_8
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4857..5642
DNA (786bp) protein (262aa)
bacitracin resistance protein BacA; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RBG_13_Deltaproteobacteria_53_10_curated
uppP; protein UppP (EC:3.6.1.27)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000371ABB1
13_1_20cm_4_scaffold_926_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5657..6262
DNA (606bp) protein (202aa)
biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RBG_16_Gemmatimo
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8L6_GEMAT
biotin/acetyl-CoA-carboxylase ligase
13_1_20cm_4_scaffold_926_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6270..7091
DNA (822bp) protein (274aa)
putative transcriptional acitvator, Baf family; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=GWC2_Gemmatimonadetes_71_10_curated
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=COAX_MOOTA
13_1_20cm_4_scaffold_926_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7088..8011
DNA (924bp) protein (308aa)
UbiA prenyltransferase; K04040 chlorophyll synthase [EC:2.5.1.62] Tax=GWC2_Gemmatimonadetes_71_10_curated
UbiA prenyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3A9_9BACT
ubia prenyltransferase
13_1_20cm_4_scaffold_926_12
unknown

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8064..8672
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_20cm_4_scaffold_926_13
unknown

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8675..8959
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_20cm_4_scaffold_926_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8943..9875
DNA (933bp) protein (311aa)
NLP/P60 protein n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IYK1_DEIGD
cell wall-associated hydrolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
NLP/P60 protein
13_1_20cm_4_scaffold_926_15
unknown

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9872..10102
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_926_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10196..10504
DNA (309bp) protein (103aa)
10 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH10_GEMAT
groES; 10 kDa chaperonin; K04078 chaperonin GroES Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
10 kDa chaperonin
13_1_20cm_4_scaffold_926_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10530..12161
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CH60_GEMAT
groEL; 60 kDa chaperonin; K04077 chaperonin GroEL Tax=GWC2_Gemmatimonadetes_71_10_curated
60 kDa chaperonin
13_1_20cm_4_scaffold_926_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12258..14192
DNA (1935bp) protein (645aa)
HEAT-like repeat-containing protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AGF9_GEOSK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HEAT-like repeat-containing protein
13_1_20cm_4_scaffold_926_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14189..15388
DNA (1200bp) protein (400aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cyclic diguanylate phosphodiesterase id=4952582 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_4_scaffold_926_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15385..15765
DNA (381bp) protein (127aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_926_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15767..17623)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37280.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
putative protein kinase
13_1_20cm_4_scaffold_926_22
unknown

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comp(17620..17736)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_20cm_4_scaffold_926_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(17733..18656)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type
13_1_20cm_4_scaffold_926_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(18653..19519)
DNA (867bp) protein (289aa)
manC; putative mannose-1-phosphate guanylyltransferase (EC:2.7.7.13); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative mannose-1-phosphate guanylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M1_GEMAT
Nucleotidyl transferase
13_1_20cm_4_scaffold_926_25
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19492..19890)
DNA (399bp) protein (133aa)
histidine kinase n=1 Tax=Pseudomonas mendocina RepID=UPI00037B430A
Histidine kinase {ECO:0000313|EMBL:ERH47071.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina EG
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_926_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19904..20257)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M3_GEMAT
hypothetical protein; K07131 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_926_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20350..20913
DNA (564bp) protein (188aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_926_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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20917..22176
DNA (1260bp) protein (420aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine--tRNA ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDI4_9FIRM
Seryl-tRNA synthetase
13_1_20cm_4_scaffold_926_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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22151..23332
DNA (1182bp) protein (394aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M6_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
ATP-binding region ATPase domain protein
13_1_20cm_4_scaffold_926_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23329..25575
DNA (2247bp) protein (749aa)
ATP-dependent DNA helicase (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8M7_GEMAT
Displaying items 1-30 of 34 in total

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