ggKbase home page

13_1_20cm_4_scaffold_184_12

Organism: 13_1_20cm_4_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(9264..9629)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlor UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 107.0
  • Bit_score: 111
  • Evalue 6.70e-22
RNA polymerase sigma factor id=4650330 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 109.0
  • Bit_score: 112
  • Evalue 3.70e-22
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 107.0
  • Bit_score: 111
  • Evalue 1.30e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chlorobium chlorochromatii → Chlorobium → Chlorobiales → Chlorobia → Chlorobi → Bacteria

Sequences

DNA sequence
Length: 366
ATGGGTTACTCTATGGCCTCGACCCCACCACCCGCGCCCACGCCGACGCCCGCCGCCGACGCCGAGAAGCGCGCCAGTTTCGAGCGGGAAGCACTGGTGCATTTGGACAGCCTGTACCGGGTGGCGCTGCGCCTCACCGGAAACGCCGCGGAAGCCGACGACCTCGTCCAGGAGACGATGCTCAAGGCGTATCGCGCCTGGCACCAGTACGAAAAGGGCACCAACGCCAAGGGCTGGCTCCTGACCATCCTGCGACACGCCTTCATTAATGAATACCGGCGCCGCACGCGGCACCCGGAGACCGTGGACCTGGACGCGATCGAGCCGTTTTCGGTGTTCGAGGCGAGGTGCCGGTGGGCACGGTGA
PROTEIN sequence
Length: 122
MGYSMASTPPPAPTPTPAADAEKRASFEREALVHLDSLYRVALRLTGNAAEADDLVQETMLKAYRAWHQYEKGTNAKGWLLTILRHAFINEYRRRTRHPETVDLDAIEPFSVFEARCRWAR*