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13_1_20cm_4_scaffold_184

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_184_1
unknown

Not on your lists

comp(122..724)
DNA (603bp) protein (201aa)

This feature has no annotations

13_1_20cm_4_scaffold_184_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

767..1603
DNA (837bp) protein (279aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=CG_Arma_01
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
13_1_20cm_4_scaffold_184_3
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1600..2526
DNA (927bp) protein (309aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R3S6_PIRSD
13_1_20cm_4_scaffold_184_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

2523..3503
DNA (981bp) protein (327aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="unc
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPN3_9BACT
13_1_20cm_4_scaffold_184_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3486..5351)
DNA (1866bp) protein (622aa)
fabF; 3-oxoacyl-ACP synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
13_1_20cm_4_scaffold_184_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5348..5812)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA34_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Polyketide cyclase/dehydrase
13_1_20cm_4_scaffold_184_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5779..6486)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA33_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_184_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6483..6971)
DNA (489bp) protein (163aa)
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
flavin reductase domain-containing protein id=14625818 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
flavin reductase domain protein FMN-binding protein
13_1_20cm_4_scaffold_184_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6968..8194)
DNA (1227bp) protein (409aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA31_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
monooxygenase FAD-binding protein
13_1_20cm_4_scaffold_184_10
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8244..8954)
DNA (711bp) protein (237aa)
hypothetical protein Tax=GWB2_Chloroflexi_54_36_curated
hypothetical protein id=14430416 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_184_11
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8951..9175)
DNA (225bp) protein (75aa)
Glycosyltransferase n=1 Tax=Rothia mucilaginosa (strain DY-18) RepID=D2NSB4_ROTMD
Glycosyltransferase {ECO:0000313|EMBL:BAI64540.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mu
glycosyltransferase
13_1_20cm_4_scaffold_184_12
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9264..9629)
DNA (366bp) protein (122aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlor
RNA polymerase sigma factor id=4650330 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
RNA polymerase sigma factor RpoE
13_1_20cm_4_scaffold_184_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9691..10296
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA29_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_184_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10296..11498
DNA (1203bp) protein (401aa)
Putative M24 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA28_GEMAT
putative M24 family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative M24 family peptidase
13_1_20cm_4_scaffold_184_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11796..15044
DNA (3249bp) protein (1083aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium SCGC AAA298-D23 RepID=UPI00039D4CFC
Outer membrane receptor protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Outer membrane receptor protein
13_1_20cm_4_scaffold_184_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15121..18909
DNA (3789bp) protein (1263aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKM1_RHOM4
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_184_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18920..20050
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGU3_IGNAJ
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_184_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20193..21464
DNA (1272bp) protein (424aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ial:IALB_0760 hypothetical protein id=720511 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
13_1_20cm_4_scaffold_184_19
unknown

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21503..23353
DNA (1851bp) protein (617aa)

This feature has no annotations

13_1_20cm_4_scaffold_184_20
unknown

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23449..23820
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_4_scaffold_184_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23841..24665)
DNA (825bp) protein (275aa)
Cytochrome oxidase assembly family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA24_GEMAT
cytochrome oxidase assembly family protein; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cytochrome oxidase assembly
13_1_20cm_4_scaffold_184_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

24707..26080
DNA (1374bp) protein (458aa)
Amino acid transporter n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXX2_9DELT
putative permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative permease
13_1_20cm_4_scaffold_184_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

26170..27066
DNA (897bp) protein (299aa)
TonB-dependent outer membrane receptor Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
rmg:Rhom172_0311 TonB-dependent outer membrane receptor id=719545 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Displaying 23 items

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