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13_2_20cm_scaffold_1014

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1014_1
RBG_16_Archaea_50_20_curated, Archaea

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326..2314
DNA (1989bp) protein (663aa)
Putative circadian clock protein, KaiC n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0H8_THEPD
hypothetical protein containing KaiC-domain
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_scaffold_1014_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2365..3144
DNA (780bp) protein (260aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] Tax=RBG_13_Bathyarchaeota_38_9_curated
diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=DPHB_THEKO
13_2_20cm_scaffold_1014_3
unknown

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3459..4025
DNA (567bp) protein (189aa)

This feature has no annotations

13_2_20cm_scaffold_1014_4
unknown

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4277..4522
DNA (246bp) protein (82aa)

This feature has no annotations

13_2_20cm_scaffold_1014_5
unknown

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4467..4790
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_scaffold_1014_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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4886..5407
DNA (522bp) protein (174aa)
NUDIX hydrolase, coenzyme A pyrophosphatase family n=2 Tax=Geobacter sulfurreducens RepID=D7AEV1_GEOSK
NUDIX hydrolase Tax=RBG_16_Acidobacteria_68_9_curated
NUDIX hydrolase, coenzyme A pyrophosphatase family
13_2_20cm_scaffold_1014_7
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

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comp(5411..6268)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002F70D89
hypothetical protein
TIGR00268 family protein {ECO:0000313|EMBL:AFY58767.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
13_2_20cm_scaffold_1014_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6280..7107
DNA (828bp) protein (276aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L453_KORCO
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898 Tax=RBG_13_Bathyarchaeota_38_9_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
13_2_20cm_scaffold_1014_9
RBG_16_Archaea_50_20_curated, Archaea

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7648..8097
DNA (450bp) protein (150aa)
flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=4 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036AF918
flap endonuclease-1
13_2_20cm_scaffold_1014_10
unknown

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comp(8084..8398)
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_scaffold_1014_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8411..8617
DNA (207bp) protein (69aa)
taqD; glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39); K14656 FAD synthetase Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_2_20cm_scaffold_1014_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(8614..9285)
DNA (672bp) protein (224aa)
rfk; riboflavin kinase (EC:2.7.1.161) Tax=RBG_13_Bathyarchaeota_38_9_curated
rfk; riboflavin kinase (EC:2.7.1.161)
Riboflavin kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGD2_NITGG
13_2_20cm_scaffold_1014_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9282..9929)
DNA (648bp) protein (216aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFJ7_RHOM4
Deoxyribonuclease V
13_2_20cm_scaffold_1014_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9926..10564)
DNA (639bp) protein (213aa)
Predicted RNA-binding protein of the translin family n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TY62_METKA
Translin family protein; K07477 translin Tax=RBG_13_Bathyarchaeota_38_9_curated
RNA-binding protein
13_2_20cm_scaffold_1014_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(10623..11210)
DNA (588bp) protein (196aa)
psmB2; proteasome subunit beta (EC:3.4.25.1) Tax=RBG_16_Bathyarchaeota_48_13_curated
psmB1; proteasome, subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8N0_9ARCH
13_2_20cm_scaffold_1014_16

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comp(11318..11860)
DNA (543bp) protein (181aa)
Activator of Hsp90 ATPase 1 (Fragment) n=1 Tax=uncultured microorganism RepID=K0J366_9ZZZZ
Activator of Hsp90 ATPase 1 {ECO:0000313|EMBL:BAM62519.1}; Flags: Fragment;; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
13_2_20cm_scaffold_1014_17
Ignisphaera aggregans, Ignisphaera, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(12171..13274)
DNA (1104bp) protein (368aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-terminal phosphate cyclase n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SPE7_IGNAA rbh
13_2_20cm_scaffold_1014_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13335..13913
DNA (579bp) protein (193aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_13_Bathyarchaeota_38_9_curated
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=OGT_THEKO
Methylated DNA-protein cysteine methyltransferase
13_2_20cm_scaffold_1014_19
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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14006..14434
DNA (429bp) protein (143aa)
hypothetical protein; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B7Y6_ACIHW
Nicotinamide-nucleotide adenylyltransferase, NadM family
13_2_20cm_scaffold_1014_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(14431..15222)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T8R9_9EURY
hypothetical protein; K09134 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_2_20cm_scaffold_1014_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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15334..16479
DNA (1146bp) protein (382aa)
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9P6_NITGG
aminotransferase OR putativesoluble hydrogenase, small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
aminotransferase OR putativesoluble hydrogenase, small subunit
13_2_20cm_scaffold_1014_22
RBG_16_Archaea_50_20_curated, Archaea

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16484..17368
DNA (885bp) protein (295aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Archaea_50_20_curated
FKBP-type peptidylprolyl isomerase id=14428048 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_2_20cm_scaffold_1014_23
RBG_16_Archaea_50_20_curated, Archaea

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17587..18123
DNA (537bp) protein (179aa)
proteasome subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RBG_16_Archaea_50_20_curated
Proteasome subunit beta n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=PSB_METTH
proteasome subunit beta
13_2_20cm_scaffold_1014_24
RBG_16_Archaea_50_20_curated, Archaea

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18176..18676
DNA (501bp) protein (167aa)
Polyadenylation specificity factor-like protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMC0_THEBM
beta-lactamase; K07041 Tax=RBG_16_Archaea_50_20_curated
polyadenylation specificity factor-like protein
Displaying 24 items

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