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13_2_20cm_scaffold_1018

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1018_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(1..624)
DNA (624bp) protein (208aa)
histidine kinase Tax=RBG_16_NC10_65_8_curated
Putative Hybrid sensor histidine kinase id=4475560 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_1018_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1101..2858
DNA (1758bp) protein (586aa)
ABC transporter related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZL5_RUBXD
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABG03163.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
13_2_20cm_scaffold_1018_3
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2965..3726
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NAD0_9DEIN
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
13_2_20cm_scaffold_1018_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3752..4369)
DNA (618bp) protein (206aa)
Thiol-disulfide isomerase and thioredoxins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiol-disulfide isomerase and thioredoxins id=3830905 bin=GWF2_Methylomirabilis_70_14 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Redoxin domain-containing protein
13_2_20cm_scaffold_1018_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4433..5395
DNA (963bp) protein (321aa)
Putative lipoprotein id=1709658 bin=GWA2_Methylomirabilis_73_35 species=Teredinibacter turnerae genus=Teredinibacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipoprotein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1018_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5468..8311
DNA (2844bp) protein (948aa)
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glr3436 protein id=3830908 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glpC; D-lactate dehydrogenase (cytochrome)
13_2_20cm_scaffold_1018_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8312..9172)
DNA (861bp) protein (287aa)
metallo-beta-lactamase family protein id=14626395 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10 rbh
metallo-beta-lactamase family protein Tax=CSP1_6_Rokubacteria
metallo-beta-lactamase family protein
13_2_20cm_scaffold_1018_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9232..9966
DNA (735bp) protein (245aa)
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4766447 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glutamine amidotransferase
13_2_20cm_scaffold_1018_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9991..10482)
DNA (492bp) protein (164aa)
id=4885132 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14625322 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_1018_10
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10618..11466
DNA (849bp) protein (283aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Probable carboxymethylenebutenolidase n=1 Tax=Limnobacter sp. MED105 RepID=A6GSC2_9BURK
dienelactone hydrolase-like enzyme Tax=RBG_16_Deltaproteobacteria_50_11_curated
13_2_20cm_scaffold_1018_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11501..12385)
DNA (885bp) protein (295aa)
response regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator receiver modulated metal dependent phosphohydrolase id=14626650 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
13_2_20cm_scaffold_1018_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12556..13506)
DNA (951bp) protein (317aa)
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Diguanylate cyclase id=2338959 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase
13_2_20cm_scaffold_1018_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13562..13801
DNA (240bp) protein (80aa)
SirA family protein id=14626647 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
SirA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SirA family protein
13_2_20cm_scaffold_1018_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13761..14963
DNA (1203bp) protein (401aa)
class V aminotransferase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=GWA2_Rokubacteria_73_35_curated
class V aminotransferase (EC:2.8.1.7)
Aminotransferase class V id=2338873 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1018_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14995..15687
DNA (693bp) protein (231aa)
gph; phosphoglycolate phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hydrolase, haloacid dehalogenase-like family id=2338871 bin=GWA2_Methylomirabilis_73_35 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1018_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15684..16133
DNA (450bp) protein (150aa)
hypothetical protein id=2338870 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_1018_17
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16160..16417)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00038105C4
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AFZ24593.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
Displaying 17 items

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