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13_2_20cm_scaffold_11051

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_11051_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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23..304
DNA (282bp) protein (94aa)
50S ribosomal protein L23P n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YMI9_9EURY
50S ribosomal protein L23P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Ribosomal protein L23
13_2_20cm_scaffold_11051_2

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304..969
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381615B
Large subunit ribosomal protein L2 {ECO:0000313|EMBL:AJS13290.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein L2
13_2_20cm_scaffold_11051_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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972..1439
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037DD1D8
ribosomal protein S19/S15 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
30S ribosomal protein S19
13_2_20cm_scaffold_11051_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1447..1902
DNA (456bp) protein (152aa)
50S ribosomal protein L22 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000366A406
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) Tax=RBG_16_Euryarchaeota_68_13_curated
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal)
13_2_20cm_scaffold_11051_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1904..2788
DNA (885bp) protein (295aa)
30S ribosomal protein S3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I7_9EURY
rps3p; 30S ribosomal protein S3P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps3p; 30S ribosomal protein S3P
13_2_20cm_scaffold_11051_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2821..3054
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000378FEBB
50S ribosomal protein L29P Tax=RBG_16_Euryarchaeota_67_27_curated
50S ribosomal protein L29P
13_2_20cm_scaffold_11051_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3054..3308
DNA (255bp) protein (85aa)
rpp29; ribonuclease P subunit P29 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LMX7_METBM
Translation initiation factor SUI1-related protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_scaffold_11051_8

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3315..3713
DNA (399bp) protein (133aa)
30S ribosomal protein S17P n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB39_ACIB4
Small subunit ribosomal protein S17 {ECO:0000313|EMBL:AJS13157.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P
13_2_20cm_scaffold_11051_9

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3710..4108
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJQ3_ACIS0
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P
13_2_20cm_scaffold_11051_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4118..4477
DNA (360bp) protein (120aa)
50S ribosomal protein L24P n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL24_AERPE
rpl24p; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Euryarchaeota_67_27_curated
rpl24p; 50S ribosomal protein L24
13_2_20cm_scaffold_11051_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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4747..5145
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003630352
ribosomal protein S4E, central domain protein; K02987 small subunit ribosomal protein S4e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ribosomal protein S4E, central domain protein
13_2_20cm_scaffold_11051_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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5154..5663
DNA (510bp) protein (170aa)
50S ribosomal protein L5 n=2 Tax=Euryarchaeota RepID=M9SEL6_9EURY
LSU ribosomal protein L11e (L5p) Tax=RBG_16_Euryarchaeota_68_13_curated
LSU ribosomal protein L11e (L5p)
13_2_20cm_scaffold_11051_13

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5816..6205
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D309E
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps8p; 30S ribosomal protein S8P
13_2_20cm_scaffold_11051_14

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6214..6759
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RL6_METJA
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl6p; 50S ribosomal protein L6
13_2_20cm_scaffold_11051_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6762..7046
DNA (285bp) protein (95aa)
ribosomal protein L32e; K02912 large subunit ribosomal protein L32e Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 15 items

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