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13_2_20cm_scaffold_1117

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1117_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..1634)
DNA (1632bp) protein (544aa)
Putative lipoprotein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIU7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93807.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1117_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2187..2492)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW94370.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_2_20cm_scaffold_1117_3
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2489..6895)
DNA (4407bp) protein (1469aa)
RHS repeat-associated core domain protein-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3BYY3_9FLAO
RHS repeat-associated core domain protein-containing protein {ECO:0000313|EMBL:EJL60664.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavoba
RHS repeat-associated core domain-containing protein
13_2_20cm_scaffold_1117_4
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6892..9681)
DNA (2790bp) protein (930aa)
YD repeat protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J441_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:KIA89494.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyung
hypothetical protein
13_2_20cm_scaffold_1117_5
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9877..10719)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000362D6B2
zraR4; sigma-54 dependent DNA-binding response regulator Tax=RifOxyA12_full_Proteobacteria_58_15_curated
two component sigma54 specific Fis family transcriptional regulator
13_2_20cm_scaffold_1117_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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11228..12745
DNA (1518bp) protein (506aa)
Putative General secretion pathway protein E (Type II traffic warden ATPase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJH7_9BACT
General secretion pathway protein E (Type II traffic warden ATPase) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
General secretion pathway protein E (Type II traffic warden ATPase)
13_2_20cm_scaffold_1117_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12729..13178
DNA (450bp) protein (150aa)
Putative general secretion pathway protein G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9E0_GEMAT
putative general secretion pathway protein G
Putative general secretion pathway protein G {ECO:0000313|EMBL:BAH39117.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_2_20cm_scaffold_1117_8
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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13175..14368
DNA (1194bp) protein (398aa)
Type II secretion system F domain protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9U4E0_MARPU
general secretion pathway protein F
General secretion pathway protein F {ECO:0000313|EMBL:AHF05280.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichrom
13_2_20cm_scaffold_1117_9
unknown

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14375..14689
DNA (315bp) protein (105aa)

This feature has no annotations

13_2_20cm_scaffold_1117_10
unknown

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14667..15026
DNA (360bp) protein (120aa)

This feature has no annotations

13_2_20cm_scaffold_1117_11
unknown

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15023..15565
DNA (543bp) protein (181aa)

This feature has no annotations

13_2_20cm_scaffold_1117_12
unknown

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15565..16464
DNA (900bp) protein (300aa)

This feature has no annotations

13_2_20cm_scaffold_1117_13
unknown

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16461..17648
DNA (1188bp) protein (396aa)

This feature has no annotations

13_2_20cm_scaffold_1117_14
unknown

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17645..18235
DNA (591bp) protein (197aa)

This feature has no annotations

13_2_20cm_scaffold_1117_15
unknown

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18232..18723
DNA (492bp) protein (164aa)

This feature has no annotations

13_2_20cm_scaffold_1117_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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18720..20198
DNA (1479bp) protein (493aa)
Putative general secretion pathway protein D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7C5_GEMAT
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:AHG91941.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1117_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20259..20738
DNA (480bp) protein (160aa)
Similar to ASPIC and UnbV protein containing FG-GAP repeats n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L5F2_ZOBGA
ASPIC/UnbV-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ASPIC/UnbV-like protein
13_2_20cm_scaffold_1117_18
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20725..21276
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BWA4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM84920.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
ASPIC/UnbV-like protein
Displaying 18 items

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