ggKbase home page

13_2_20cm_scaffold_1330

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1330_1
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

105..374
DNA (270bp) protein (90aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6) Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA-directed RNA polymerase subunit H n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DAF5_STAHD
RNA polymerase Rpb5
13_2_20cm_scaffold_1330_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

400..3747
DNA (3348bp) protein (1116aa)
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoB; DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0ILI7_NITGG
13_2_20cm_scaffold_1330_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

3750..7595
DNA (3846bp) protein (1282aa)
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG rbh
13_2_20cm_scaffold_1330_4
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists


7626..7907
DNA (282bp) protein (94aa)
50S ribosomal protein L30 n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI0003744309
50S ribosomal protein L30e; K02908 large subunit ribosomal protein L30e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L30e
13_2_20cm_scaffold_1330_5
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7907..8344
DNA (438bp) protein (146aa)
Probable transcription termination protein NusA n=3 Tax=Sulfolobus acidocaldarius RepID=NUSA_SULAC
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=RBG_16_Archaea_50_20_curated
transcription elongation factor NusA-like protein
13_2_20cm_scaffold_1330_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


8662..9099
DNA (438bp) protein (146aa)
30S ribosomal protein S12 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=RS12_THEPD
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RBG_13_Bathyarchaeota_38_9_curated
rps12P; 30S ribosomal protein S12P
13_2_20cm_scaffold_1330_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(9449..10645)
DNA (1197bp) protein (399aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RBG_16_Archaea_50_20_curated
glycine cleavage system T protein (EC:2.1.2.10)
hypothetical protein n=1 Tax=Bacillus sp. 37MA RepID=UPI000367F18F
13_2_20cm_scaffold_1330_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

11225..11473
DNA (249bp) protein (83aa)
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_scaffold_1330_9
unknown

Not on your lists

comp(11791..12531)
DNA (741bp) protein (247aa)

This feature has no annotations

13_2_20cm_scaffold_1330_10
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(12670..13521)
DNA (852bp) protein (284aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C415_9CREN
ABC transporter permease {ECO:0000313|EMBL:EWG07613.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales archaeon AZ1.;"
hypothetical protein
13_2_20cm_scaffold_1330_11
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13518..14096)
DNA (579bp) protein (193aa)
ABC transporter related protein n=2 Tax=Thermoanaerobacter RepID=D3T505_THEIA
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADD03298.1}; Flags: Precursor;; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerob
13_2_20cm_scaffold_1330_12
unknown

Not on your lists

comp(14531..15238)
DNA (708bp) protein (236aa)

This feature has no annotations

13_2_20cm_scaffold_1330_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15439..15993
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Oceanobacillus kimchii RepID=UPI0003468DD5
N-acetyltransferase GCN5 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
N-acetyltransferase GCN5
13_2_20cm_scaffold_1330_14
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16137..17306
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0M0M3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69888.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_scaffold_1330_15
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

17303..18883
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0LQ98_9EURY rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB69887.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_scaffold_1330_16
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

18948..19847
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N336_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69886.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_scaffold_1330_17
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(19753..20700)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N813_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB69885.1}; TaxID=261391 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon Gpl.
13_2_20cm_scaffold_1330_18
uncultured crenarchaeote 57a5, Crenarchaeota, Archaea

Not on your lists

21065..22312
DNA (1248bp) protein (416aa)
Nitroreductase related protein n=1 Tax=uncultured crenarchaeote 57a5 RepID=D4N734_9CREN
Nitroreductase related protein {ECO:0000313|EMBL:ACY24520.1}; TaxID=684058 species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 57a5.;"
hypothetical protein
13_2_20cm_scaffold_1330_19
unknown

Not on your lists

22406..22576
DNA (171bp) protein (57aa)

This feature has no annotations

13_2_20cm_scaffold_1330_20
unknown

Not on your lists

comp(22604..22894)
DNA (291bp) protein (97aa)

This feature has no annotations

Displaying 20 items

View Taxonomy