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13_2_20cm_scaffold_1362

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1362_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..823)
DNA (822bp) protein (274aa)
Transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q987H2_RHILO
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAB53231.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (
13_2_20cm_scaffold_1362_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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971..1717
DNA (747bp) protein (249aa)
Probable dehydrogenase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q987H1_RHILO rbh
dehydrogenase
Probable dehydrogenase {ECO:0000313|EMBL:BAB53232.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (str
13_2_20cm_scaffold_1362_3
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1732..2385
DNA (654bp) protein (218aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEU34637.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEU34637.1};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriacea
3-ketoacyl-ACP reductase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E888C
3-oxoacyl-(acyl-carrier-protein) reductase
13_2_20cm_scaffold_1362_4
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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2858..2992
DNA (135bp) protein (45aa)
Tax=BJP_IG2069_Anaerolineales_43_63
13_2_20cm_scaffold_1362_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3011..3418
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037E83DF
alkyl hydroperoxide reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein
13_2_20cm_scaffold_1362_6
unknown

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comp(3492..3680)
DNA (189bp) protein (63aa)

This feature has no annotations

13_2_20cm_scaffold_1362_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3762..4610
DNA (849bp) protein (283aa)
Tax=RBG_16_Desulfobacca_60_12_curated
13_2_20cm_scaffold_1362_8
unknown

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comp(4849..4959)
DNA (111bp) protein (37aa)

This feature has no annotations

13_2_20cm_scaffold_1362_9
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

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5691..6020
DNA (330bp) protein (110aa)
Transcriptional regulator, PadR family n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZRG7_ANACC
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AFZ61137.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899
13_2_20cm_scaffold_1362_10
unknown

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6037..6462
DNA (426bp) protein (142aa)

This feature has no annotations

13_2_20cm_scaffold_1362_11
unknown

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comp(6502..7392)
DNA (891bp) protein (297aa)

This feature has no annotations

13_2_20cm_scaffold_1362_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7461..9278)
DNA (1818bp) protein (606aa)
aldehyde ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aldehyde ferredoxin oxidoreductase id=3789300 bin=GWA2_Methylomirabilis_73_35 species=halophilic archaeon DL31 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1362_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(9281..11794)
DNA (2514bp) protein (838aa)
h16_A0376; O-linked N-acetylglucosamine transferase OGT (EC:2.-.-.-)
nrfG; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Lytic transglycosylase id=3789302 bin=GWA2_Methylomirabilis_73_35 species=Danio rerio genus=Danio taxon_order=Cypriniformes taxon_class=Actinopterygii phylum=Chordata tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1362_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(12191..13564)
DNA (1374bp) protein (458aa)
Outer membrane assembly lipoprotein YfiO id=3789304 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane assembly lipoprotein YfiO Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1362_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13604..14251
DNA (648bp) protein (216aa)
phosphatase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3789308 bin=GWA2_Methylomirabilis_73_35 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase
13_2_20cm_scaffold_1362_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14332..15612
DNA (1281bp) protein (427aa)
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative polynucleotide enzyme with nucleotide triphosphate hydrolase domain id=3192758 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
13_2_20cm_scaffold_1362_17
unknown

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15663..16310
DNA (648bp) protein (216aa)

This feature has no annotations

13_2_20cm_scaffold_1362_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16352..17239
DNA (888bp) protein (296aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=14626264 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
D-alanine--D-alanine ligase (EC:6.3.2.4)
Displaying 18 items

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