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13_2_20cm_scaffold_1413

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1413_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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2..544
-----------------
DNA (543bp)
protein (181aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyan
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IW09_POLGS rbh
3-hydroxyanthranilate 3,4-dioxygenase
13_2_20cm_scaffold_1413_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(557..1321)
-----------------
DNA (765bp)
protein (255aa)
mandelate racemase/muconate lactonizing enzyme; K01781 mandelate racemase [EC:5.1.2.2] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D379_BRAJP
mandelate racemase
13_2_20cm_scaffold_1413_3
unknown

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1459..1566
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

13_2_20cm_scaffold_1413_4
unknown

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1739..1873
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

13_2_20cm_scaffold_1413_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1873..2562
-----------------
DNA (690bp)
protein (230aa)
amidohydrolase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003817E77
Crystal Structure Of 2,6-Dihydroxybenzoate Decarboxylase {ECO:0000313|EMBL:EGP57964.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob
amidohydrolase 2
13_2_20cm_scaffold_1413_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2636..3559)
-----------------
DNA (924bp)
protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LL10_9RHOB
13_2_20cm_scaffold_1413_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3775..4200
-----------------
DNA (426bp)
protein (142aa)
Heat shock protein Hsp20 n=2 Tax=Rhodopseudomonas palustris RepID=B3Q5Y9_RHOPT
heat shock protein Hsp20
Putative small heat shock protein {ECO:0000313|EMBL:CAE25498.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodop
13_2_20cm_scaffold_1413_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4247..4513
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHC3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13371.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
hypothetical protein
13_2_20cm_scaffold_1413_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4698..4961
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWC7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34642.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
13_2_20cm_scaffold_1413_10
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5004..5846
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000376F4E1
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AFZ53204.1}; TaxID=755178 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain
13_2_20cm_scaffold_1413_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5858..6319)
-----------------
DNA (462bp)
protein (154aa)
Nitrogen regulatory protein (Enzyme IIA-NTR) {ECO:0000313|EMBL:CCE09457.1}; EC=2.7.1.- {ECO:0000313|EMBL:CCE09457.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
Nitrogen regulatory protein (Enzyme IIA-NTR) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TSL9_9BRAD
nitrogen regulatory protein
13_2_20cm_scaffold_1413_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6394..7002)
-----------------
DNA (609bp)
protein (203aa)
Ribosomal subunit interface protein n=2 Tax=Bradyrhizobiaceae RepID=F7QGP6_9BRAD
Ribosomal subunit interface protein {ECO:0000313|EMBL:EGP09691.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bact
sigma 54 modulation protein/ribosomal protein S30EA
13_2_20cm_scaffold_1413_13
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7134..8639)
-----------------
DNA (1506bp)
protein (502aa)
RNA polymerase sigma-54 factor n=1 Tax=Rhodovulum sp. PH10 RepID=J6JD98_9RHOB rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulu
rpoN; sigma 54
13_2_20cm_scaffold_1413_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8803..9711)
-----------------
DNA (909bp)
protein (303aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B6EDA4
ABC transporter ATPase
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI04808.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="
13_2_20cm_scaffold_1413_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9873..10502)
-----------------
DNA (630bp)
protein (210aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P5Y7_9BRAD
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EKS33833.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
OstA-like protein
13_2_20cm_scaffold_1413_16
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10499..11215)
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F57C34
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA03440.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
13_2_20cm_scaffold_1413_17
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11573..12760
-----------------
DNA (1188bp)
protein (396aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ16 RepID=UPI00035E5BE2
Phage P4-type tyrosine recombinase {ECO:0000313|EMBL:EZP50525.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. R
phage integrase
13_2_20cm_scaffold_1413_18
unknown

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13003..13233
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

Displaying 18 items

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