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13_2_20cm_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_138_1
unknown

Not on your lists

1..108
DNA (108bp) protein (36aa)

This feature has no annotations

13_2_20cm_scaffold_138_2
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122..724)
DNA (603bp) protein (201aa)
putative integral membrane protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
Putative uncharacterized protein id=3895114 bin=GWC2_Nitrospirae_57_13 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
13_2_20cm_scaffold_138_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(809..1600)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LP14_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_scaffold_138_4
unknown

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1779..2195
DNA (417bp) protein (139aa)

This feature has no annotations

13_2_20cm_scaffold_138_5
unknown

Not on your lists

2199..2612
DNA (414bp) protein (138aa)

This feature has no annotations

13_2_20cm_scaffold_138_6
unknown

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2996..3274
DNA (279bp) protein (93aa)

This feature has no annotations

13_2_20cm_scaffold_138_7
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3399..4250
DNA (852bp) protein (284aa)
(2R)-phospho-3-sulfolactate synthase (EC:4.4.-.-)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003611442 rbh
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
13_2_20cm_scaffold_138_8
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(4261..5625)
DNA (1365bp) protein (455aa)
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79) Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHT2_9BACT
13_2_20cm_scaffold_138_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5740..6858)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C6B38
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC-2 type transporter
13_2_20cm_scaffold_138_10
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(6861..7820)
DNA (960bp) protein (320aa)
ABC transporter ATP-binding protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R2X9_METFO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF85592.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="
ABC transporter ATP-binding protein
13_2_20cm_scaffold_138_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8092..8931)
DNA (840bp) protein (280aa)
sdr-2; glucose/ribitol dehydrogenase family protein (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7A9_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH79770.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
13_2_20cm_scaffold_138_12
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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9063..9707
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKK4_METP4
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADN35857.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="
13_2_20cm_scaffold_138_13
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

9760..10881
DNA (1122bp) protein (374aa)
M50 family peptidase (EC:3.4.24.-)
zinc metalloprotease Tax=RBG_16_Archaea_50_20_curated
protease id=14631826 bin=bin9_gal15 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
13_2_20cm_scaffold_138_14
unknown

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11025..11387
DNA (363bp) protein (121aa)

This feature has no annotations

13_2_20cm_scaffold_138_15

Not on your lists

11561..12802
DNA (1242bp) protein (414aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase (EC:1.2.1.70)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00036D7773
13_2_20cm_scaffold_138_16

Not on your lists

12957..13787
DNA (831bp) protein (277aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Uncharacterized protein {ECO:0000313|EMBL:KKN60358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Delta-aminolevulinic acid dehydratase id=4717295 bin=GWC2_Nitrospirae-rel_56_14 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
13_2_20cm_scaffold_138_17

Not on your lists

13772..15067
DNA (1296bp) protein (432aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QZE4_METFO
Uncharacterized protein {ECO:0000313|EMBL:KKN41525.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_138_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15076..16011
DNA (936bp) protein (312aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:00
Probable porphobilinogen deaminase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INK5_NITGG
13_2_20cm_scaffold_138_19

Not on your lists

16019..16795
DNA (777bp) protein (259aa)
Uroporphyrinogen III methyltransferase / synthase (CobA-hemD) {ECO:0000313|EMBL:AIF17920.1}; EC=2.1.1.107 {ECO:0000313|EMBL:AIF17920.1};; TaxID=1456297 species="Archaea; Thaumarchaeota; environmental
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI0003682B55
uroporphyrinogen III synthase HEM4
13_2_20cm_scaffold_138_20
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16899..17408)
DNA (510bp) protein (170aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI000369B542
ferrochelatase
13_2_20cm_scaffold_138_21
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(17746..18789)
DNA (1044bp) protein (348aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF7_9CHLR
13_2_20cm_scaffold_138_22
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(18809..19504)
DNA (696bp) protein (232aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
Uncharacterized conserved protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWF5_9BACT
hypothetical protein
13_2_20cm_scaffold_138_23
unknown

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comp(19717..20391)
DNA (675bp) protein (225aa)

This feature has no annotations

13_2_20cm_scaffold_138_24
RBG_16_Archaea_50_20_curated, Archaea

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comp(20441..22525)
DNA (2085bp) protein (695aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.-) Tax=RBG_16_Archaea_50_20_curated
copA; copper-exporting P-type ATPase A (EC:3.6.3.-)
Copper-exporting P-type ATPase A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ63_NITGG rbh
13_2_20cm_scaffold_138_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(22729..23826)
DNA (1098bp) protein (366aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_2_20cm_scaffold_138_26
unknown

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24408..24770
DNA (363bp) protein (121aa)

This feature has no annotations

13_2_20cm_scaffold_138_27
unknown

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comp(25108..25395)
DNA (288bp) protein (96aa)

This feature has no annotations

13_2_20cm_scaffold_138_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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25542..25766
DNA (225bp) protein (75aa)
Hypothetical membrane protein Tax=RBG_16_Euryarchaeota_41_19_curated
13_2_20cm_scaffold_138_29
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(25787..26164)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A482_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX12571.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_2_20cm_scaffold_138_30
unknown

Not on your lists

comp(26177..26668)
DNA (492bp) protein (164aa)
UspA domain-containing protein
Displaying items 1-30 of 62 in total

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