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13_2_20cm_scaffold_14225

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_14225_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..949)
DNA (948bp) protein (316aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG2_9BACT
13_2_20cm_scaffold_14225_2
unknown

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comp(996..1475)
DNA (480bp) protein (160aa)

This feature has no annotations

13_2_20cm_scaffold_14225_3
unknown

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1490..1639
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_14225_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1656..2963
DNA (1308bp) protein (436aa)
glycosyl transferase group 1 n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017453C1 rbh
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
glycosyltransferase
13_2_20cm_scaffold_14225_5
unknown

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comp(2985..3326)
DNA (342bp) protein (114aa)

This feature has no annotations

13_2_20cm_scaffold_14225_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3825..4379
DNA (555bp) protein (185aa)
3-isopropylmalate dehydratase, small subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG3_9BACT rbh
3-isopropylmalate dehydratase, small subunit {ECO:0000313|EMBL:EEF61014.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosp
3-isopropylmalate dehydratase small subunit
13_2_20cm_scaffold_14225_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4493..5128
DNA (636bp) protein (212aa)
Pyridoxal 5'-phosphate synthase {ECO:0000256|SAAS:SAAS00025317}; EC=1.4.3.5 {ECO:0000256|SAAS:SAAS00025317};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Ver
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG5_9BACT
13_2_20cm_scaffold_14225_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5294..6226)
DNA (933bp) protein (311aa)
Glucosamine/galactosamine-6-phosphate isomerase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLY4_9BACT
glucosamine-6-phosphate isomerase
Glucosamine/galactosamine-6-phosphate isomerase {ECO:0000313|EMBL:EEF59112.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
13_2_20cm_scaffold_14225_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6238..7026)
DNA (789bp) protein (263aa)
LmbE family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLY7_9BACT rbh
LmbE family protein {ECO:0000313|EMBL:EEF59115.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedospha
LmbE family protein
13_2_20cm_scaffold_14225_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7061..7423)
DNA (363bp) protein (121aa)
Oxidoreductase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLY8_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF59116.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source
13_2_20cm_scaffold_14225_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7440..8024)
DNA (585bp) protein (195aa)
Oxidoreductase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLY8_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF59116.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source
oxidoreductase domain protein
13_2_20cm_scaffold_14225_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

8284..8721
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62260.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_2_20cm_scaffold_14225_13
unknown

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comp(8701..8898)
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_scaffold_14225_14
unknown

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comp(8963..9586)
DNA (624bp) protein (208aa)

This feature has no annotations

13_2_20cm_scaffold_14225_15
R_OD1_Nomurabacteria_42_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9818..10264
DNA (447bp) protein (149aa)
cytochrome C family protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_42_19_curated
hypothetical protein id=12557454 bin=CNBR_ACIDO species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_2_20cm_scaffold_14225_16
unknown

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10578..10667
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 16 items

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