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13_2_20cm_scaffold_1457

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1457_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..342
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003762E64
Uncharacterized protein {ECO:0000313|EMBL:ETX07993.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_2_20cm_scaffold_1457_2
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(329..607)
DNA (279bp) protein (93aa)
hypothetical protein id=4761905 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein Tax=GWA2_Elusimicrobia_69_24_curated
13_2_20cm_scaffold_1457_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(616..1278)
DNA (663bp) protein (221aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2338868 bin=GWA2_Methylomirabilis_73_35 species=Campylobacter coli genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1457_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1304..1720)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003604EFC
Uncharacterized protein {ECO:0000313|EMBL:ETX06724.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
5,10-methylene tetrahydromethanopterin reductase
13_2_20cm_scaffold_1457_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2212..3147
DNA (936bp) protein (312aa)
alcohol dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alcohol dehydrogenase, zinc-binding domain protein id=2319311 bin=GWA2_Methylomirabilis_73_35 species=Calothrix sp. PCC 7507 genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_2_20cm_scaffold_1457_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3170..4069)
DNA (900bp) protein (300aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
2-(Hydroxymethyl)glutarate dehydrogenase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IT16_9FIRM
6-phosphogluconate dehydrogenase NAD-binding protein
13_2_20cm_scaffold_1457_7
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4070..4822)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ66_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC17887.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
13_2_20cm_scaffold_1457_8
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4869..5705)
DNA (837bp) protein (279aa)
ABC transporter n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PSW9_MEIRD
ABC transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATC
13_2_20cm_scaffold_1457_9
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5705..6508)
DNA (804bp) protein (268aa)
ABC transporter related protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BGL2_MEISD
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADH63828.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (stra
13_2_20cm_scaffold_1457_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6867..8339
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TF75_9BRAD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_2_20cm_scaffold_1457_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8336..9208
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037FF12A
Uncharacterized protein {ECO:0000313|EMBL:ETX01424.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative oxidoreductase
13_2_20cm_scaffold_1457_12
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9511..9750)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO83860.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
13_2_20cm_scaffold_1457_13
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9810..10709)
DNA (900bp) protein (300aa)
Putative uncharacterized protein id=4202595 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Membrane protein {ECO:0000313|EMBL:ESY06538.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC39
hypothetical protein
13_2_20cm_scaffold_1457_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10712..11815)
DNA (1104bp) protein (368aa)
aminocarboxymuconate-semialdehyde decarboxylase; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000315EB83
amidohydrolase 2
13_2_20cm_scaffold_1457_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11911..12714
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000363AFD3
Uncharacterized protein {ECO:0000313|EMBL:ETW99554.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
13_2_20cm_scaffold_1457_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12724..13605)
DNA (882bp) protein (294aa)
Putative F420-dependent oxidoreductase, MSMEG_3544 family id=2767983 bin=GWF2_Methylomirabilis_70_14 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW95088.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative oxidoreductase
13_2_20cm_scaffold_1457_17
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13607..15376)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UMD8_ANASK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG72959.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_2_20cm_scaffold_1457_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15373..16227)
DNA (855bp) protein (285aa)
N-formylglutamate deformylase (EC:3.5.1.68); K01458 N-formylglutamate deformylase [EC:3.5.1.68] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-formylglutamate amidohydrolase n=1 Tax=Caulobacter sp. AP07 RepID=J3A502_9CAUL
N-formylglutamate amidohydrolase
13_2_20cm_scaffold_1457_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16306..16893
DNA (588bp) protein (196aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3869242 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
13_2_20cm_scaffold_1457_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16899..17480
DNA (582bp) protein (194aa)
Putative uncharacterized protein id=4202731 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1457_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17484..17816)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YU72_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_2_20cm_scaffold_1457_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17826..18227)
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_2_20cm_scaffold_1457_23
unknown

Not on your lists

comp(18268..19008)
DNA (741bp) protein (247aa)

This feature has no annotations

13_2_20cm_scaffold_1457_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19164..21164
DNA (2001bp) protein (667aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=GWA2_Rokubacteria_73_35_curated
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B id=3435283 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_1457_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21173..21448
DNA (276bp) protein (92aa)
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=GWA2_Rokubacteria_73_35_curated
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3)
DNA topoisomerase VI, subunit A id=3435284 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1457_26
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21445..22233
DNA (789bp) protein (263aa)
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
top6A; DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY5_9BACT
13_2_20cm_scaffold_1457_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

22329..22934
DNA (606bp) protein (202aa)
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein id=14627267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
sugar ABC transporter substrate-binding protein
13_2_20cm_scaffold_1457_28
R_NC10_66_22, NC10, Bacteria

Not on your lists

22940..23581
DNA (642bp) protein (214aa)
Multiple sugar transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRR5_9BRAD
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
sugar uptake ABC transporter periplasmic solute-binding protein
13_2_20cm_scaffold_1457_29
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23672..24532
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMD8_BRAJP
ABC transporter permease {ECO:0000313|EMBL:KGT73303.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japon
hypothetical protein
13_2_20cm_scaffold_1457_30
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24534..24956
DNA (423bp) protein (141aa)
Binding-protein-dependent transport systems inner membrane component id=3247809 bin=GWF2_Methylomirabilis_70_14 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:CCE09830.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" s
inner membrane ABC transporter permease YcjP
Displaying 30 items

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