ggKbase home page

13_2_20cm_scaffold_1490

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1490_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMI8_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFG66699.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Mi
ABC transporter substrate-binding protein
13_2_20cm_scaffold_1490_2
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

600..3770
DNA (3171bp) protein (1057aa)
Proline dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UH73_9RHOB rbh
Integrase {ECO:0000313|EMBL:KFG66696.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
13_2_20cm_scaffold_1490_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3941..4285
DNA (345bp) protein (115aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TM3_RHOP5
phosphoribosyl-ATP pyrophosphohydrolase
13_2_20cm_scaffold_1490_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4428..4946
DNA (519bp) protein (173aa)
DedA family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J7G3_9RHOB
Cytochrome B561 {ECO:0000313|EMBL:ETR77347.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
DedA family
13_2_20cm_scaffold_1490_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5020..5601
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52581.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
13_2_20cm_scaffold_1490_6
bacterium YEK0313, Bacteria

Not on your lists

5708..7078
DNA (1371bp) protein (457aa)
Putative homoserine dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VXX5_9BRAD
SAF domain protein {ECO:0000313|EMBL:CEJ10148.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oxidoreductase domain-containing protein
13_2_20cm_scaffold_1490_7

Not on your lists

7205..8119
DNA (915bp) protein (305aa)
UPI0003D5B101 related cluster n=1 Tax=unknown RepID=UPI0003D5B101
Helix-turn-helix domain, rpiR family {ECO:0000313|EMBL:AIA12726.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RpiR3; transcriptional regulator
13_2_20cm_scaffold_1490_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8215..8901)
DNA (687bp) protein (229aa)
2-phospho-L-lactate guanylyltransferase (EC:2.7.7.68) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
2-phospho-L-lactate guanylyltransferase id=4828295 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_1490_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8898..9869)
DNA (972bp) protein (324aa)
LPPG:FO 2-phospho-L-lactate transferase (EC:2.7.8.28) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035E7D71
2-phospho-L-lactate transferase
13_2_20cm_scaffold_1490_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9866..10627)
DNA (762bp) protein (254aa)
LPPG:FO 2-phospho-L-lactate transferase (EC:2.7.8.28) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000381F660
F420-dependent oxidoreductase
13_2_20cm_scaffold_1490_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10812..11795)
DNA (984bp) protein (328aa)
Methyltransferase family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVH4_9BRAD rbh
Methyltransferase family protein {ECO:0000313|EMBL:EIG63780.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
methyltransferase domain protein
13_2_20cm_scaffold_1490_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11883..12410
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJU9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27825.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
13_2_20cm_scaffold_1490_13
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12477..13592)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K6R0_9MYCO
hydrolase Tax=RBG_16_Alphaproteobacteria_64_48_curated
hydrolase
13_2_20cm_scaffold_1490_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13962..14798
DNA (837bp) protein (279aa)
universal stress protein UspA n=1 Tax=Methylocystis parvus RepID=UPI0002E6DF8D
putative universal stress protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
UspA domain-containing protein
13_2_20cm_scaffold_1490_15
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15007..16344
DNA (1338bp) protein (446aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1M7_9BURK rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDT09973.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
major facilitator superfamily protein
13_2_20cm_scaffold_1490_16
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16404..17582)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QGV2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG59008.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=
hypothetical protein
13_2_20cm_scaffold_1490_17
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18131..18955)
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X5_ALIDB
LacI family transcriptional regulator {ECO:0000313|EMBL:KJC58479.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
hypothetical protein
Displaying 17 items

View Taxonomy