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13_2_20cm_scaffold_1572

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1572_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

304..516
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D437E
putative outer membrane protein Tax=CSP1_5_NC10
outer membrane protein
13_2_20cm_scaffold_1572_2
unknown

Not on your lists

526..828
DNA (303bp) protein (101aa)

This feature has no annotations

13_2_20cm_scaffold_1572_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(850..2238)
DNA (1389bp) protein (463aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1884909 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigma-54 dependent DNA-binding response regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=GWA2_Rokubacteria_73_35_curated
sigma-54 dependent DNA-binding response regulator
13_2_20cm_scaffold_1572_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2231..3526)
DNA (1296bp) protein (432aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integral membrane sensor signal transduction histidine kinase id=1884757 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1572_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3627..4217)
DNA (591bp) protein (197aa)
membrane-associated protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SNARE associated Golgi protein-like protein id=2913053 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DedA protein family
13_2_20cm_scaffold_1572_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4261..5328
DNA (1068bp) protein (356aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=1884755 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase
13_2_20cm_scaffold_1572_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5334..5786)
DNA (453bp) protein (151aa)
RlpA-like lipoprotein id=2336348 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
rare lipoprotein A
13_2_20cm_scaffold_1572_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5950..7674
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECZ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF82556.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
phosphoglycolate phosphatase
13_2_20cm_scaffold_1572_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7693..8670)
DNA (978bp) protein (326aa)
Putative uncharacterized protein id=1884751 bin=GWA2_Methylomirabilis_73_35 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1572_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8674..9147)
DNA (474bp) protein (158aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 11 id=1884749 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Methyltransferase type 11
13_2_20cm_scaffold_1572_11
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(9214..10377)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6DABF
hypothetical protein Tax=CG_Arma_02
hypothetical protein
13_2_20cm_scaffold_1572_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(10374..10976)
DNA (603bp) protein (201aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] id=14627128 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
isochorismatase hydrolase
13_2_20cm_scaffold_1572_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

11034..12140
DNA (1107bp) protein (369aa)
acetamidase/formamidase id=14627591 bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
acetamidase/formamidase Tax=CSP1_6_Rokubacteria
acetamidase/formamidase
13_2_20cm_scaffold_1572_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12191..13054
DNA (864bp) protein (288aa)
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein id=14627590 bin=bin7_NC10_sister species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic solute binding protein
13_2_20cm_scaffold_1572_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

13061..14347
DNA (1287bp) protein (429aa)
ABC-3 protein; K02075 zinc/manganese transport system permease protein id=14627589 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=CSP1_6_Rokubacteria
ABC-3 protein
13_2_20cm_scaffold_1572_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14386..15177)
DNA (792bp) protein (264aa)
id=4827479 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4827479 Tax=GWA2_Rokubacteria_70_23_curated
13_2_20cm_scaffold_1572_17
unknown

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15364..15651
DNA (288bp) protein (96aa)

This feature has no annotations

13_2_20cm_scaffold_1572_18
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15800..16477
DNA (678bp) protein (226aa)
asparagine synthase n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00036F1313
asparagine synthase Tax=RBG_16_Desulfobacca_60_12_curated
asparagine synthase
13_2_20cm_scaffold_1572_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16627..17244)
DNA (618bp) protein (206aa)
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EYF05663.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="
13_2_20cm_scaffold_1572_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(17244..18959)
DNA (1716bp) protein (572aa)
Multicopper oxidase type 3 n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYE9_META2
Multicopper oxidase type 3 (fragment) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Multicopper oxidase type 3 (fragment)
13_2_20cm_scaffold_1572_21
unknown

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20196..23936
DNA (3741bp) protein (1247aa)

This feature has no annotations

Displaying 21 items

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