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13_2_20cm_scaffold_1658

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1658_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..355)
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14627257 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_1658_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1252..2172
DNA (921bp) protein (307aa)
Heme-binding protein A (Hemin-binding lipoprotein) id=3467128 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
heme-binding protein A (Hemin-binding lipoprotein); K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter substrate-binding protein
13_2_20cm_scaffold_1658_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2190..3242
DNA (1053bp) protein (351aa)
thioesterase superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Thioesterase superfamily protein id=3467151 bin=GWA2_Methylomirabilis_73_35 species=Vulcanisaeta moutnovskia genus=Vulcanisaeta taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioesterase
13_2_20cm_scaffold_1658_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3248..3997
DNA (750bp) protein (250aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626991 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_2_20cm_scaffold_1658_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4134..4502
DNA (369bp) protein (123aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
crossover junction endodeoxyribonuclease ruvC id=4319708 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1658_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4510..5163
DNA (654bp) protein (218aa)
DNA recombination protein RuvA domain I; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=GWA2_Rokubacteria_73_35_curated
DNA recombination protein RuvA domain I; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=14626993 bin=bin7_NC10_sister species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA recombination protein RuvA domain I
13_2_20cm_scaffold_1658_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5160..6227
DNA (1068bp) protein (356aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=GWA2_Rokubacteria_73_35_curated
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB id=4319707 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1658_8
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6232..6447
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA00_GEOUR
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
hypothetical protein
13_2_20cm_scaffold_1658_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6444..7562
DNA (1119bp) protein (373aa)
SpoIID/LytB domain-containing protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SpoIID/LytB domain protein id=4319706 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell division protein
13_2_20cm_scaffold_1658_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7605..7901
DNA (297bp) protein (99aa)
export-related chaperone CsaA; K06878 tRNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Export-related chaperone CsaA id=4284345 bin=GWC2_Methylomirabilis_70_16 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Export-related chaperone CsaA
13_2_20cm_scaffold_1658_11
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7953..9095
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E8S2_GEOSM
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
hypothetical protein
13_2_20cm_scaffold_1658_12
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9092..9469
DNA (378bp) protein (126aa)
hypothetical protein Tax=GWC2_Geobacteraceae_58_44_curated
Putative uncharacterized protein id=1714409 bin=GWB2_Desulfobacterales_56_26 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_1658_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9494..10528
DNA (1035bp) protein (345aa)
S-adenosylmethionine; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=4319702 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
13_2_20cm_scaffold_1658_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10641..11783
DNA (1143bp) protein (381aa)
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=4319701 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_1658_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11811..12155
DNA (345bp) protein (115aa)
preprotein translocase, YajC subunit Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Preprotein translocase subunit YajC id=4319700 bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yajC; preprotein translocase subunit YajC
13_2_20cm_scaffold_1658_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12148..12858
DNA (711bp) protein (237aa)
protein translocase subunit; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
protein translocase subunit; K03072 preprotein translocase subunit SecD id=14627005 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
protein translocase subunit
Displaying 16 items

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