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13_2_20cm_scaffold_16960

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_16960_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2..835)
DNA (834bp) protein (278aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
tRNA(Ile)-lysidine synthase id=4681946 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_16960_2
unknown

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913..1005
DNA (93bp) protein (31aa)

This feature has no annotations

13_2_20cm_scaffold_16960_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(1088..1516)
DNA (429bp) protein (143aa)
moaDE; molybdopterin converting factor, subunits 1/2; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
molybdopterin synthase subunit MoaE (EC:2.8.1.12)
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE id=4681945 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_16960_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1513..1851)
DNA (339bp) protein (113aa)
MoaD family protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=GWA2_Rokubacteria_73_35_curated
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE id=4139270 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine S protein
13_2_20cm_scaffold_16960_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1862..2191)
DNA (330bp) protein (110aa)
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Iron-binding protein IscA (Iron-sulfur cluster assembly protein) id=4681944 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein)
13_2_20cm_scaffold_16960_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(2246..2968)
DNA (723bp) protein (241aa)
short chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GTP cyclohydrolase I id=4681943 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
13_2_20cm_scaffold_16960_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(2965..3528)
DNA (564bp) protein (188aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
folE; GTP cyclohydrolase I (EC:3.5.4.16) id=14626369 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
folE; GTP cyclohydrolase I (EC:3.5.4.16)
13_2_20cm_scaffold_16960_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3525..3944)
DNA (420bp) protein (140aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase id=4681942 bin=GWA2_Methylomirabilis_73_35 species=Gracilibacillus halophilus genus=Gracilibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_16960_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4034..4459)
DNA (426bp) protein (142aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4534447 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_16960_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4456..5484)
DNA (1029bp) protein (343aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=4681940 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_2_20cm_scaffold_16960_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5490..6278)
DNA (789bp) protein (263aa)
Enoyl-CoA hydratase/isomerase id=4534449 bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase family protein Tax=GWA2_Rokubacteria_73_35_curated
enoyl-CoA hydratase
13_2_20cm_scaffold_16960_12
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

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6679..6999
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Entamoeba histolytica RepID=C4LYC3_ENTHI
Uncharacterized protein {ECO:0000313|EMBL:KFY95156.1}; TaxID=1420913 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseu
rne; ribonuclease E Rne
13_2_20cm_scaffold_16960_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7027..7809
DNA (783bp) protein (261aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14626359 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_16960_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7748..8062)
DNA (315bp) protein (105aa)
lipoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lipoprotein id=14626358 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
lipoprotein
13_2_20cm_scaffold_16960_15
unknown

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comp(8139..8456)
DNA (318bp) protein (106aa)

This feature has no annotations

13_2_20cm_scaffold_16960_16
unknown

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comp(8465..8848)
DNA (384bp) protein (128aa)

This feature has no annotations

Displaying 16 items

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