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13_2_20cm_scaffold_170

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_170_1
unknown

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3..80
DNA (78bp) protein (26aa)

This feature has no annotations

13_2_20cm_scaffold_170_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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89..1348
DNA (1260bp) protein (420aa)
Glycoside hydrolase family protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VWY4_9EURY
glycoside hydrolase family protein
Glycoside hydrolase family protein {ECO:0000313|EMBL:AGN00771.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. H
13_2_20cm_scaffold_170_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1388..2332
DNA (945bp) protein (315aa)
UPI0003CEB07B related cluster n=1 Tax=unknown RepID=UPI0003CEB07B
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
binding-protein-dependent transport system inner membrane protein
13_2_20cm_scaffold_170_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2340..3812
DNA (1473bp) protein (491aa)
ABC-type dipeptide/oligopeptide transport system, permease component n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YV28_THEON
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
dipeptide/oligopeptide ABC transporter permease
13_2_20cm_scaffold_170_5
unknown

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3846..4808
DNA (963bp) protein (321aa)

This feature has no annotations

13_2_20cm_scaffold_170_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4878..5843
DNA (966bp) protein (322aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24442405 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oligopeptide/dipeptide ABC transporter ATPase
13_2_20cm_scaffold_170_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5840..6856
DNA (1017bp) protein (339aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IAI9_ACIB4
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
peptide ABC transporter ATPase
13_2_20cm_scaffold_170_8
unknown

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comp(7003..7668)
DNA (666bp) protein (222aa)

This feature has no annotations

13_2_20cm_scaffold_170_9
unknown

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7825..8751
DNA (927bp) protein (309aa)

This feature has no annotations

13_2_20cm_scaffold_170_10
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8885..10933
DNA (2049bp) protein (683aa)
Regulator of chromosome condensation RCC1 id=4013043 bin=GWC2_Syntrophobacterales_56_13 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
FG-GAP repeat protein {ECO:0000313|EMBL:ELR99332.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
FG-GAP repeat-containing protein
13_2_20cm_scaffold_170_11
unknown

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comp(10950..11084)
DNA (135bp) protein (45aa)

This feature has no annotations

13_2_20cm_scaffold_170_12

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11155..13737
DNA (2583bp) protein (861aa)
Marine sediment metagenome DNA, contig: S01H1_S20313 {ECO:0000313|EMBL:GAG15135.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
family 5 extracellular solute-binding protein
13_2_20cm_scaffold_170_13
unknown

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13878..14351
DNA (474bp) protein (158aa)

This feature has no annotations

13_2_20cm_scaffold_170_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(15540..16301)
DNA (762bp) protein (254aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator, TrmB-like
13_2_20cm_scaffold_170_15
uncultured marine crenarchaeote AD1000-23-H12, Nitrosopumilales, Thaumarchaeota, Archaea

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16414..17565
DNA (1152bp) protein (384aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=1 Tax=uncultured marine crenarchaeote AD1000-23-H12 RepID=B3V6G0_9ARCH
Dinitrogenase iron-molybdenum cofactor biosynthesis {ECO:0000313|EMBL:ACF09884.1}; TaxID=526638 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine c
Mrp protein
13_2_20cm_scaffold_170_16
unknown

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17780..18112
DNA (333bp) protein (111aa)

This feature has no annotations

13_2_20cm_scaffold_170_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(18789..19202)
DNA (414bp) protein (138aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_2_20cm_scaffold_170_18
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

20169..20474
DNA (306bp) protein (102aa)
DUF59 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKL9_NITGG
hypothetical protein Tax=RBG_16_Thaumarchaeota_49_8_curated
putative metal-sulfur cluster biosynthetic enzyme
13_2_20cm_scaffold_170_19
RBG_16_Archaea_50_20_curated, Archaea

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20943..22799
DNA (1857bp) protein (619aa)
2-oxoacid:acceptor oxidoreductase subunit alpha (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_16_Archaea_50_20_curated
2:oxoacid-ferredoxin oxidoreductase, fused alpha and gamma subunit (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5D9CE rbh
13_2_20cm_scaffold_170_20
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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22792..23721
DNA (930bp) protein (310aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:BAJ48840.1}; EC=1.2.7.3 {ECO:0000313|EMBL:BAJ48840.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeo
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N971_9ARCH
13_2_20cm_scaffold_170_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(23741..24595)
DNA (855bp) protein (285aa)
NAD+ synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
NH(3)-dependent NAD(+) synthetase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T6A5_9EURY
NAD+ synthetase
13_2_20cm_scaffold_170_22
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(24636..25832)
DNA (1197bp) protein (399aa)
Proteasome-activating nucleotidase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=PAN_THEGJ
proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000255|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000255|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000255|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
13_2_20cm_scaffold_170_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(25978..26532)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LJC3_THEBM
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
13_2_20cm_scaffold_170_24
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

26936..27226
DNA (291bp) protein (97aa)
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein id=14429902 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
AsnC family transcriptional regulator
13_2_20cm_scaffold_170_25
unknown

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comp(27400..27600)
DNA (201bp) protein (67aa)

This feature has no annotations

13_2_20cm_scaffold_170_26
unknown

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comp(27662..28741)
DNA (1080bp) protein (360aa)

This feature has no annotations

13_2_20cm_scaffold_170_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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29516..29929
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037114AE
NAD-dependent aldehyde dehydrogenase Tax=RBG_16_Euryarchaeota_68_12_curated
aldehyde dehydrogenase
Displaying 27 items

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