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13_2_20cm_scaffold_1715

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1715_1
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(3..728)
DNA (726bp) protein (242aa)
glgB; glycogen branching enzyme (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=planctomycete KSU-1 RepID=I3IMF6_9PLAN
glycogen branching protein
13_2_20cm_scaffold_1715_2
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(838..3252)
DNA (2415bp) protein (805aa)
PAS domain-containing protein/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Thauera sp. 28 RepID=N6ZPD4_9RHOO
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV25953.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae;
13_2_20cm_scaffold_1715_3

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3613..3885
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1CHG4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD65764.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_1715_4
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3919..5226)
DNA (1308bp) protein (436aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=Novispirillum itersonii RepID=UPI00037D94E9 rbh
gabT; 4-aminobutyrate transaminase Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
13_2_20cm_scaffold_1715_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5223..5696)
DNA (474bp) protein (158aa)
Isoquinoline 1-oxidoreductase; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
(2Fe-2S)-binding protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QLE3_RALPI
(2Fe-2S)-binding protein
13_2_20cm_scaffold_1715_6

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5896..6954
DNA (1059bp) protein (353aa)
trxB; thioredoxin reductase oxidoreductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=mine drainage metagenome RepID=T0YVP8_9ZZZZ
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EQD37098.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_2_20cm_scaffold_1715_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6979..7443
DNA (465bp) protein (155aa)
Azurin blue-copper protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC97_ALIDK
azurin blue-copper protein
Azurin blue-copper protein {ECO:0000313|EMBL:AEB84756.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
13_2_20cm_scaffold_1715_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7471..8334
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037DF2F4
Palmitoyl-CoA hydrolase {ECO:0000313|EMBL:KGM55439.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
palmitoyl-CoA hydrolase
13_2_20cm_scaffold_1715_9
unknown

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8357..9316
DNA (960bp) protein (320aa)

This feature has no annotations

13_2_20cm_scaffold_1715_10
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

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comp(9310..10218)
DNA (909bp) protein (303aa)
Alpha/beta hydrolase fold protein id=4485401 bin=GWF2_OP3_38_59 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
alpha/beta hydrolase fold protein Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
alpha/beta hydrolase fold protein
13_2_20cm_scaffold_1715_11
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10230..11657)
DNA (1428bp) protein (476aa)
FAD linked oxidase n=1 Tax=Thauera aminoaromatica S2 RepID=N6Y3T0_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KIN88585.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
FAD linked oxidase
13_2_20cm_scaffold_1715_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11654..12532)
DNA (879bp) protein (293aa)
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-] id=12496279 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Protease HtpX homolog {ECO:0000255|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_00188};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogen
heat shock protein HtpX
13_2_20cm_scaffold_1715_13

Not on your lists

comp(12659..13714)
DNA (1056bp) protein (352aa)
Membrane protein containing DUF125, transmembrane n=1 Tax=mine drainage metagenome RepID=T1A2Q4_9ZZZZ rbh
Membrane protein containing DUF125, transmembrane {ECO:0000313|EMBL:EQD36100.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;
hypothetical protein
13_2_20cm_scaffold_1715_14

Not on your lists

comp(13711..14061)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1A5F5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD36099.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_1715_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14133..15323
DNA (1191bp) protein (397aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=PROB_MAGSA rbh
13_2_20cm_scaffold_1715_16
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15330..16145
DNA (816bp) protein (272aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
proA; glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QZZ0_9RHIZ
Displaying 16 items

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