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13_2_20cm_scaffold_1719

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1719_1
GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, GWC2_Methylomirabilis_70_16, Methylomirabilis, Bacteria

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comp(3..128)
DNA (126bp) protein (42aa)
Response regulatory protein id=4224084 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_1719_2
unknown

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comp(478..744)
DNA (267bp) protein (89aa)

This feature has no annotations

13_2_20cm_scaffold_1719_3
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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944..1711
DNA (768bp) protein (256aa)
TPR repeats containing protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V3_METCZ
hypothetical protein
TPR repeats containing protein {ECO:0000313|EMBL:AFC99770.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella co
13_2_20cm_scaffold_1719_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1718..2074)
DNA (357bp) protein (119aa)
id=4253856 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=4253856 Tax=GWA2_Rokubacteria_70_23_curated
13_2_20cm_scaffold_1719_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2625..3212)
DNA (588bp) protein (196aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BGS8_9RHIZ
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AGK59350.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicr
13_2_20cm_scaffold_1719_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3388..3597
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00036D3CC0
Tax=RBG_16_Actinobacteria_67_10_curated
13_2_20cm_scaffold_1719_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3612..4109)
DNA (498bp) protein (166aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TraR/DksA family id=2811598 bin=GWC2_Methylomirabilis_70_24 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TraR/DksA family transcriptional regulator
13_2_20cm_scaffold_1719_8
unknown

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4340..4501
DNA (162bp) protein (54aa)

This feature has no annotations

13_2_20cm_scaffold_1719_9
unknown

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4506..4847
DNA (342bp) protein (114aa)

This feature has no annotations

13_2_20cm_scaffold_1719_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5101..6921
DNA (1821bp) protein (607aa)
Probable potassium transport system protein kup n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q5_GEMAT
Low affinity potassium transport system protein kup
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1719_11
unknown

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comp(6929..7336)
DNA (408bp) protein (136aa)

This feature has no annotations

13_2_20cm_scaffold_1719_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7555..9090)
DNA (1536bp) protein (512aa)
Radical SAM domain protein id=3823497 bin=GWF2_Methylomirabilis_70_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Fe-S oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
Fe-S oxidoreductase
13_2_20cm_scaffold_1719_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9087..9479)
DNA (393bp) protein (131aa)
Response regulator receiver id=2455318 bin=GWC2_Methylomirabilis_70_24 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator receiver Tax=GWA2_Rokubacteria_70_23_curated
response regulator receiver
13_2_20cm_scaffold_1719_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9461..9709)
DNA (249bp) protein (83aa)
response regulator receiver Tax=GWA2_Rokubacteria_70_23_curated
Response regulator receiver id=2455318 bin=GWC2_Methylomirabilis_70_24 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
two component LuxR family transcriptional regulator
13_2_20cm_scaffold_1719_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9706..11322)
DNA (1617bp) protein (539aa)
nodV; nodulation protein V Tax=GWA2_Rokubacteria_70_23_curated
Multi-sensor signal transduction histidine kinase id=4374373 bin=GWC2_Methylomirabilis_70_24 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
nodV; nodulation protein V
13_2_20cm_scaffold_1719_16
unknown

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comp(11394..11543)
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_1719_17
unknown

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comp(11540..11695)
DNA (156bp) protein (52aa)

This feature has no annotations

13_2_20cm_scaffold_1719_18
unknown

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11861..12058
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 18 items

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