ggKbase home page

13_2_20cm_scaffold_17317

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_17317_1
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


2..166
DNA (165bp) protein (55aa)
50S ribosomal protein L16 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQL8_9FIRM
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" so
13_2_20cm_scaffold_17317_2
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


163..606
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000366A266
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
50S ribosomal protein L29
13_2_20cm_scaffold_17317_3
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


599..895
DNA (297bp) protein (99aa)
30S ribosomal protein S17 n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FCP7_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; envir
30S ribosomal protein S17
13_2_20cm_scaffold_17317_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists


898..1266
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2L5_SPHTD
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphae
13_2_20cm_scaffold_17317_5
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


1269..1655
DNA (387bp) protein (129aa)
50S ribosomal protein L24 n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UD86_FERPD
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans (
13_2_20cm_scaffold_17317_6
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


1652..2248
DNA (597bp) protein (199aa)
50S ribosomal protein L5 n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HDU1_9BACL
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperid
50S ribosomal protein L5
13_2_20cm_scaffold_17317_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


2255..2803
DNA (549bp) protein (183aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_RIF_CHLX_69_14_curated
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=14629536 bin=bin8_Chloro species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
30S ribosomal protein S8
13_2_20cm_scaffold_17317_8
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


3130..3303
DNA (174bp) protein (58aa)
50S ribosomal protein L6 n=1 Tax=Serinicoccus profundi RepID=UPI000255E667
rplF; 50S ribosomal protein L6
Tax=BJP_IG2157_Actinomycetales_63_19
13_2_20cm_scaffold_17317_9
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3310..3663
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thermincola potens (strain JR) RepID=D5XA99_THEPJ
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR
13_2_20cm_scaffold_17317_10
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3667..4503
DNA (837bp) protein (279aa)
30S ribosomal protein S5 n=1 Tax=Desulfurispora thermophila RepID=UPI000371F862
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;"
13_2_20cm_scaffold_17317_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists


4500..4772
DNA (273bp) protein (91aa)
50S ribosomal protein L30 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EC54_9CHLR
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Spha
13_2_20cm_scaffold_17317_12
Lactobacillus saerimneri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


4773..5258
DNA (486bp) protein (162aa)
50S ribosomal protein L15 n=1 Tax=Lactobacillus saerimneri 30a RepID=M5J887_9LACO
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1227363 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" so
rplO; 50S ribosomal protein L15
13_2_20cm_scaffold_17317_13

Not on your lists


5828..6511
DNA (684bp) protein (228aa)
Preprotein translocase, secy subunit (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YV63_9ZZZZ
Preprotein translocase, secy subunit {ECO:0000313|EMBL:EQD39471.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagen
preprotein translocase subunit SecY
13_2_20cm_scaffold_17317_14
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

6576..7274
DNA (699bp) protein (233aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3P5_ANATU
13_2_20cm_scaffold_17317_15
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7271..8047
DNA (777bp) protein (259aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJK1_SYNLT
13_2_20cm_scaffold_17317_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8503..8883
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Clostridium ultunense Esp RepID=M1Z6U5_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
30S ribosomal protein S13
Displaying 16 items

View Taxonomy