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13_2_20cm_scaffold_1915

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1915_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..763
DNA (762bp) protein (254aa)
Peptidase S1C, Do n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUH1_RHOP2
peptidase S1C, Do
Peptidase S1C, Do {ECO:0000313|EMBL:ABD08139.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rho
13_2_20cm_scaffold_1915_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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845..1519
DNA (675bp) protein (225aa)
Response regulator in two-component regulatory system with PhoQ n=1 Tax=Rhodovulum sp. PH10 RepID=J6IYL2_9RHOB
Response regulator in two-component regulatory system with PhoQ {ECO:0000313|EMBL:EJW10185.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
winged helix family two component transcriptional regulator
13_2_20cm_scaffold_1915_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1566..2954
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bra
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07Q97_RHOP5
periplasmic sensor signal transduction histidine kinase
13_2_20cm_scaffold_1915_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3155..6103
DNA (2949bp) protein (983aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PEP1_9RHOB rbh
13_2_20cm_scaffold_1915_5
unknown

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6139..6324
DNA (186bp) protein (62aa)

This feature has no annotations

13_2_20cm_scaffold_1915_6
unknown

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6317..6493
DNA (177bp) protein (59aa)

This feature has no annotations

13_2_20cm_scaffold_1915_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6556..8346
DNA (1791bp) protein (597aa)
Amino acid adenylation protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A2P8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY52618.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
amino acid adenylation protein rbh
13_2_20cm_scaffold_1915_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8405..10717)
DNA (2313bp) protein (771aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodo
Two-component sensor histidine kinase PleC n=1 Tax=Rhodovulum sp. PH10 RepID=J6IYN1_9RHOB rbh
multi-sensor signal transduction histidine kinase
13_2_20cm_scaffold_1915_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10938..12128)
DNA (1191bp) protein (397aa)
Membrane alanine aminopeptidase N n=1 Tax=Rhodovulum sp. PH10 RepID=J6UBU8_9RHOB
Membrane alanine aminopeptidase N {ECO:0000313|EMBL:EJW10194.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovul
aminopeptidase N
13_2_20cm_scaffold_1915_10
unknown

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comp(12396..13154)
DNA (759bp) protein (253aa)

This feature has no annotations

13_2_20cm_scaffold_1915_11
bacterium YEK0313, Bacteria

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13661..14620
DNA (960bp) protein (320aa)
Extra-cytoplasmic Solute Receptor n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LM41_RALME
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:CEJ10834.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
bug; extra-cytoplasmic solute receptor protein
13_2_20cm_scaffold_1915_12
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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14821..16308
DNA (1488bp) protein (496aa)
Amidohydrolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZJ4_RUBXD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_2_20cm_scaffold_1915_13
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16463..17476
DNA (1014bp) protein (338aa)
alcohol dehydrogenase n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003677224 rbh
zinc-binding alcohol dehydrogenase family protein
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:ACB94558.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" sou
13_2_20cm_scaffold_1915_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17549..18844)
DNA (1296bp) protein (432aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DSE4_9RHOB
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EJW09357.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rho
cation-efflux pump
13_2_20cm_scaffold_1915_15
unknown

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19008..19256
DNA (249bp) protein (83aa)

This feature has no annotations

13_2_20cm_scaffold_1915_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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19253..20257
DNA (1005bp) protein (335aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodob
tRNA-dihydrouridine synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEL2_9RHOB rbh
tRNA-dihydrouridine synthase A
13_2_20cm_scaffold_1915_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20285..21031
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J5E3_9RHOB
permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
Displaying 17 items

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