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13_2_20cm_scaffold_2012

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2012_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(27..1310)
DNA (1284bp) protein (428aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-); K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] id=1249938 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
apolipoprotein N-acyltransferase
13_2_20cm_scaffold_2012_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1322..2329)
DNA (1008bp) protein (336aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
oxidoreductase domain protein
13_2_20cm_scaffold_2012_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2326..3015)
DNA (690bp) protein (230aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_2012_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3020..4282)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain protein
13_2_20cm_scaffold_2012_5
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4251..5543)
DNA (1293bp) protein (431aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PPP6_9FIRM
13_2_20cm_scaffold_2012_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5540..6859)
DNA (1320bp) protein (440aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT
Ribosomal protein S12 methylthiotransferase rimO
13_2_20cm_scaffold_2012_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6856..7359)
DNA (504bp) protein (168aa)
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
hypothetical protein; K09767 hypothetical protein id=12555050 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_2_20cm_scaffold_2012_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7387..8244)
DNA (858bp) protein (286aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_2012_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8278..8922)
DNA (645bp) protein (215aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_2_20cm_scaffold_2012_10
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9316..10464)
DNA (1149bp) protein (383aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF4_ANASK rbh
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACG74790.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_2_20cm_scaffold_2012_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10468..10743)
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE1_ANADF
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ABS27787.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source=
13_2_20cm_scaffold_2012_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10740..11684)
DNA (945bp) protein (315aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
thrB; homoserine kinase ThrB (EC:2.7.1.39) id=14631961 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Homoserine kinase
13_2_20cm_scaffold_2012_13
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11681..12169)
DNA (489bp) protein (163aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF6_ANASK
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ACG74792.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_2_20cm_scaffold_2012_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12142..12864)
DNA (723bp) protein (241aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_2_20cm_scaffold_2012_15
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12861..13766)
DNA (906bp) protein (302aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS04_9BACT
13_2_20cm_scaffold_2012_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13978..15483)
DNA (1506bp) protein (502aa)
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K0_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90457.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2012_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15483..15737)
DNA (255bp) protein (85aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J9_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_2_20cm_scaffold_2012_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15900..16340)
DNA (441bp) protein (147aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7J8_GEMAT
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:AHG90454.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 18 items

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