ggKbase home page

13_2_20cm_scaffold_20414

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_20414_1
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..673
DNA (672bp) protein (224aa)
Phosphate transporter n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDP5_THET1
phosphate transporter
Phosphate transporter {ECO:0000313|EMBL:ABK53799.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyt
13_2_20cm_scaffold_20414_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(701..1573)
DNA (873bp) protein (291aa)
Ppx/GppA phosphatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLU0_9CHLR
Ppx/GppA phosphatase {ECO:0000313|EMBL:EFH86740.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemife
Ppx/GppA phosphatase
13_2_20cm_scaffold_20414_3
unknown

Not on your lists

comp(1537..2058)
DNA (522bp) protein (174aa)

This feature has no annotations

13_2_20cm_scaffold_20414_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

2187..3548
DNA (1362bp) protein (454aa)
fumarate lyase; K01679 fumarate hydratase, class II [EC:4.2.1.2] Tax=RBG_16_RIF_CHLX_72_14_curated
fumarate lyase; K01679 fumarate hydratase, class II [EC:4.2.1.2] id=14631501 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
fumarate lyase
13_2_20cm_scaffold_20414_5
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3567..3872)
DNA (306bp) protein (102aa)
Histone acetyltransferase HPA2 n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GTE5_DEIGI
Histone acetyltransferase HPA2
Histone acetyltransferase HPA2 {ECO:0000313|EMBL:AFD24095.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiens
13_2_20cm_scaffold_20414_6
unknown

Not on your lists

4503..5000
DNA (498bp) protein (166aa)

This feature has no annotations

13_2_20cm_scaffold_20414_7
unknown

Not on your lists

5399..5827
DNA (429bp) protein (143aa)

This feature has no annotations

13_2_20cm_scaffold_20414_8
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

6367..6588
DNA (222bp) protein (74aa)
RNA polymerase sigma70 n=1 Tax=Streptomyces RepID=UPI0003779569
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Chloroflexi_48_8_curated
RNA polymerase sigma factor
13_2_20cm_scaffold_20414_9
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6724..7518
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Frankia sp. EUN1f RepID=D3CZ63_9ACTO
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EFC83986.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
enoyl-CoA hydratase/isomerase
13_2_20cm_scaffold_20414_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

8188..9225
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036E02F6
Protein of unknown function (DUF1800) Tax=RBG_16_Armatimonadetes_67_12_curated
conserved exported protein of unknown function, DUF1800
13_2_20cm_scaffold_20414_11
unknown

Not on your lists

9229..9546
DNA (318bp) protein (106aa)

This feature has no annotations

13_2_20cm_scaffold_20414_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9546..10430
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QD00_CATAD
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:EWM12752.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria
hypothetical protein
13_2_20cm_scaffold_20414_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10486..10893)
DNA (408bp) protein (136aa)
18 kDa antigen 1 n=2 Tax=Rhodococcus RepID=J2J397_9NOCA
Heat-shock protein Hsp20 {ECO:0000313|EMBL:AII04423.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
18 kDa antigen 2
13_2_20cm_scaffold_20414_14
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11065..11862
DNA (798bp) protein (266aa)
Acetyltransferase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VWR1_9CYAN
Acetyltransferase {ECO:0000313|EMBL:ESA37025.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
N-acetyltransferase GCN5
13_2_20cm_scaffold_20414_15
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11859..12296)
DNA (438bp) protein (146aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00037EF59C
Enoyl CoA hydratase {ECO:0000313|EMBL:EIE49009.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
13_2_20cm_scaffold_20414_16
unknown

Not on your lists

comp(12629..12850)
DNA (222bp) protein (74aa)

This feature has no annotations

13_2_20cm_scaffold_20414_17
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12886..14274)
DNA (1389bp) protein (463aa)
Arabinose efflux permease family protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q110_9DELT
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIG53466.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" s
major facilitator superfamily permease
13_2_20cm_scaffold_20414_18
unknown

Not on your lists

comp(14325..14792)
DNA (468bp) protein (156aa)

This feature has no annotations

13_2_20cm_scaffold_20414_19
unknown

Not on your lists

comp(14826..15083)
DNA (258bp) protein (86aa)

This feature has no annotations

13_2_20cm_scaffold_20414_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15200..15388)
DNA (189bp) protein (63aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
Displaying 20 items

View Taxonomy