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13_2_20cm_scaffold_20564

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_20564_1
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(1..480)
DNA (480bp) protein (160aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZZ4_THERP
13_2_20cm_scaffold_20564_2
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(423..2915)
DNA (2493bp) protein (831aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_52_14_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2J8_SPHTD
DNA-directed RNA polymerase subunit beta
13_2_20cm_scaffold_20564_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2897..3196)
DNA (300bp) protein (100aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=RPOB_HERA2
rpoB; DNA-directed RNA polymerase subunit beta
13_2_20cm_scaffold_20564_4
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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3392..4543
DNA (1152bp) protein (384aa)
Aminotransferase class V n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7D5_HERA2
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ABX06418.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon auranti
13_2_20cm_scaffold_20564_5
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4588..4989
DNA (402bp) protein (134aa)
Hydrolase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EYZ4_STRRM
Hydrolase {ECO:0000313|EMBL:ELQ83347.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
hypothetical protein
13_2_20cm_scaffold_20564_6
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5031..5213
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT372 RepID=UPI00036EE49A
putative haloacid dehalogenase-like hydrolase
Hydrolase {ECO:0000313|EMBL:ELQ83347.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
13_2_20cm_scaffold_20564_7
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5215..8028
DNA (2814bp) protein (938aa)
Glycoside hydrolase family 65 central catalytic n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P4Q6_STRVO
glycoside hydrolase
Glycoside hydrolase family 65 central catalytic {ECO:0000313|EMBL:AEM83945.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
13_2_20cm_scaffold_20564_8
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists


comp(7958..8491)
DNA (534bp) protein (178aa)
50S ribosomal protein L10 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NIA2_9FIRM
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RBG_13_Chloroflexi_56_8b_curated
50S ribosomal protein L10
13_2_20cm_scaffold_20564_9
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(8718..9449)
DNA (732bp) protein (244aa)
50S ribosomal protein L1 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQJ9_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivor
rplA; 50S ribosomal protein L1
13_2_20cm_scaffold_20564_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(9449..9877)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL11_CARHZ
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_RIF_CHLX_69_14_curated
rplK; 50S ribosomal protein L11
13_2_20cm_scaffold_20564_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(9906..10469)
DNA (564bp) protein (188aa)
Transcription termination/antitermination protein NusG n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRZ9_ROSCS
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Rose
13_2_20cm_scaffold_20564_12
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10469..10705)
DNA (237bp) protein (79aa)
Preprotein translocase subunit SecE (TC 3.A.5.1.1); K03073 preprotein translocase subunit SecE Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
13_2_20cm_scaffold_20564_13
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists


comp(10713..10862)
DNA (150bp) protein (50aa)
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=24458185 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RBG_16_Armatimonadetes_67_12_curated
rpmG; 50S ribosomal protein L33
13_2_20cm_scaffold_20564_14
unknown

Not on your lists

comp(10907..11338)
DNA (432bp) protein (144aa)

This feature has no annotations

13_2_20cm_scaffold_20564_15
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

11487..12044
DNA (558bp) protein (186aa)
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5G0_HERA2
isocitrate/isopropylmalate dehydrogenase Tax=RBG_13_Chloroflexi_66_10_curated
isocitrate/isopropylmalate dehydrogenase
Displaying 15 items

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