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13_2_20cm_scaffold_20894

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_20894_1
unknown

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2..199
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_scaffold_20894_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(287..829)
DNA (543bp) protein (181aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
small GTP-binding protein
13_2_20cm_scaffold_20894_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(930..1487)
DNA (558bp) protein (186aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
small GTP-binding protein
13_2_20cm_scaffold_20894_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1550..2098)
DNA (549bp) protein (183aa)
Putative Ras family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F13 RepID=B3TBS9_9ZZZZ
small GTP-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
small GTP-binding protein
13_2_20cm_scaffold_20894_5
unknown

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2284..2448
DNA (165bp) protein (55aa)

This feature has no annotations

13_2_20cm_scaffold_20894_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2817..3617
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003782FB9
rpl3p; 50S ribosomal protein L3P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl3p; 50S ribosomal protein L3P
13_2_20cm_scaffold_20894_7

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3623..4564
DNA (942bp) protein (314aa)
50S ribosomal protein L4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I4_9EURY
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS13122.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P
13_2_20cm_scaffold_20894_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4561..4842
DNA (282bp) protein (94aa)
50S ribosomal protein L23P n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YMI9_9EURY
Ribosomal protein L23 Tax=RBG_16_Euryarchaeota_67_27_curated
50S ribosomal protein L23P
13_2_20cm_scaffold_20894_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4959..5345
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381615B
ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Euryarchaeota_67_27_curated
rpl2p; 50S ribosomal protein L2P
13_2_20cm_scaffold_20894_10

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5497..5961
DNA (465bp) protein (155aa)
30S ribosomal protein S19P n=2 Tax=Euryarchaeota RepID=M9SJ65_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S19
13_2_20cm_scaffold_20894_11

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5970..6425
DNA (456bp) protein (152aa)
50S ribosomal protein L22 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000366A406
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal)
13_2_20cm_scaffold_20894_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


6507..7319
DNA (813bp) protein (271aa)
30S ribosomal protein S3 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5I7_9EURY
rps3p; 30S ribosomal protein S3P Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps3p; 30S ribosomal protein S3P
13_2_20cm_scaffold_20894_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


7352..7570
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000378FEBB
50S ribosomal protein L29P Tax=RBG_16_Euryarchaeota_67_27_curated
50S ribosomal protein L29P
13_2_20cm_scaffold_20894_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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7571..7822
DNA (252bp) protein (84aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=RBG_16_Euryarchaeota_68_12_curated
Ribonuclease P protein component 1 n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB83_METSL
ribonuclease P protein component 1
13_2_20cm_scaffold_20894_15
unknown

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7826..7945
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 15 items

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