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13_2_20cm_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_23_1
unknown

Not on your lists

comp(75..251)
DNA (177bp) protein (59aa)

This feature has no annotations

13_2_20cm_scaffold_23_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

446..1066
DNA (621bp) protein (207aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_13_Bathyarchaeota_38_9_curated
cmk; cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=KCY_AERPE
13_2_20cm_scaffold_23_3
RBG_16_Archaea_50_20_curated, Archaea

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1110..1406
DNA (297bp) protein (99aa)
50S ribosomal protein L14e n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9Q9_STAHD
50S ribosomal protein L14e; K02875 large subunit ribosomal protein L14e Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L14E/L6E/L27E-like protein
13_2_20cm_scaffold_23_4
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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1767..2549
DNA (783bp) protein (261aa)
Probable tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01081}; Short=Psi5
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=TRUB_METKA
TruB; H/ACA RNA-protein complex component Cbf5p
13_2_20cm_scaffold_23_5
unknown

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2527..2709
DNA (183bp) protein (61aa)

This feature has no annotations

13_2_20cm_scaffold_23_6
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(2710..3561)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000371C4D2
peptidase M50 Tax=RBG_16_Thaumarchaeota_49_8_curated
peptidase M50
13_2_20cm_scaffold_23_7

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4236..4664
DNA (429bp) protein (143aa)
Marine sediment metagenome DNA, contig: S06H3_S19374 {ECO:0000313|EMBL:GAI55095.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_2_20cm_scaffold_23_8
unknown

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5091..5240
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_23_9
unknown

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comp(6018..6179)
DNA (162bp) protein (54aa)

This feature has no annotations

13_2_20cm_scaffold_23_10
unknown

Not on your lists

6766..7089
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_scaffold_23_11
unknown

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7090..7413
DNA (324bp) protein (108aa)

This feature has no annotations

13_2_20cm_scaffold_23_12
unknown

Not on your lists

7662..7925
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_23_13
unknown

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8082..8231
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_23_14
unknown

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8961..9437
DNA (477bp) protein (159aa)

This feature has no annotations

13_2_20cm_scaffold_23_15
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(9664..12009)
DNA (2346bp) protein (782aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA helicase n=1 Tax=Leptolyngbya boryana RepID=UPI00036DFEAE
Tax=BJP_IG2157_Anaerolineales_55_23
13_2_20cm_scaffold_23_16
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12468..13904
DNA (1437bp) protein (479aa)
MFS transporter n=1 Tax=Streptomyces acidiscabies RepID=UPI000288D417
Uncharacterized protein {ECO:0000313|EMBL:KIF29482.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
major facilitator superfamily protein
13_2_20cm_scaffold_23_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13958..14308)
DNA (351bp) protein (117aa)
Bll5452 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89J32_BRADU
NIPSNAP family protein {ECO:0000313|EMBL:ETX08470.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_2_20cm_scaffold_23_18
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14415..14738
DNA (324bp) protein (108aa)
CalR8 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08UB5_STIAD
ArsR family transcriptional regulator
CalR8 {ECO:0000313|EMBL:EAU64072.1}; Transcriptional regulator, ArsR domain protein {ECO:0000313|EMBL:ADO69132.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
13_2_20cm_scaffold_23_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14738..15232
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000349424C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26234.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
13_2_20cm_scaffold_23_20
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

15398..17281
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3T9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81177.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
13_2_20cm_scaffold_23_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17459..18763
DNA (1305bp) protein (435aa)
Tetracycline efflux transporter n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7J5_9BACT
MFS transporter {ECO:0000313|EMBL:KFA88393.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
tetA; tetracycline efflux transporter
13_2_20cm_scaffold_23_22

Not on your lists

comp(18812..19606)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1BUI5_9ZZZZ
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_23_23
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(19742..20221)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037C051A
Uncharacterized protein {ECO:0000313|EMBL:EQB67180.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-pl
hypothetical protein
13_2_20cm_scaffold_23_24
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20613..21008
DNA (396bp) protein (132aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
aspartate 1-decarboxylase (EC:4.1.1.11)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C26AC
13_2_20cm_scaffold_23_25
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21017..21640)
DNA (624bp) protein (208aa)
Methylase n=1 Tax=Clostridium intestinale URNW RepID=U2NQD2_9CLOT
hypothetical protein Tax=CG_Anaero_02
Methyltransferase
13_2_20cm_scaffold_23_26
unknown

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21719..22417
DNA (699bp) protein (233aa)

This feature has no annotations

13_2_20cm_scaffold_23_27
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(22427..22804)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon W5-61a RepID=H9BX82_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_2_20cm_scaffold_23_28
unknown

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comp(22856..23119)
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_23_29
unknown

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comp(23278..23772)
DNA (495bp) protein (165aa)

This feature has no annotations

13_2_20cm_scaffold_23_30
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24340..25950)
DNA (1611bp) protein (537aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEG2_9CHLR
Displaying items 1-30 of 73 in total

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