ggKbase home page

13_2_20cm_scaffold_2224

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2224_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

202..366
DNA (165bp) protein (55aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Euryarchaeota_68_12_curated
13_2_20cm_scaffold_2224_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

406..1509
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035EF944
small GTP-binding protein domain protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
small GTP-binding protein domain protein
13_2_20cm_scaffold_2224_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

1513..2532
DNA (1020bp) protein (340aa)
Glr2450 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHT5_GLOVI
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_2224_4
unknown

Not on your lists

3377..3652
DNA (276bp) protein (92aa)

This feature has no annotations

13_2_20cm_scaffold_2224_5
unknown

Not on your lists

4322..4585
DNA (264bp) protein (88aa)

This feature has no annotations

13_2_20cm_scaffold_2224_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(5241..6398)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00036DD28A
putative ABC transporter integral membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_2224_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6386..8143)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EHP6_9CHLR
putative ABC transporter integral membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_2224_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8145..8846)
DNA (702bp) protein (234aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
ABC transporter n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003811C8C
ABC transporter
13_2_20cm_scaffold_2224_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8901..9761)
DNA (861bp) protein (287aa)
type 11 methyltransferase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
methyltransferase type 11
13_2_20cm_scaffold_2224_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

9843..10652
DNA (810bp) protein (270aa)
NAD+ synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5] Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035CFD43
NAD+ synthetase
13_2_20cm_scaffold_2224_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10602..11156)
DNA (555bp) protein (185aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
13_2_20cm_scaffold_2224_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11485..12717
DNA (1233bp) protein (411aa)
ORC1-type DNA replication protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4F2_9EURY
cdc6; cell division control protein 6 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cdc6; cell division control protein 6
13_2_20cm_scaffold_2224_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12692..13753)
DNA (1062bp) protein (354aa)
Signal sequence peptidase n=1 Tax=mine drainage metagenome RepID=T1B133_9ZZZZ
signal peptidase I Tax=RBG_16_Euryarchaeota_67_27_curated
signal peptidase I
13_2_20cm_scaffold_2224_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13804..14520)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z7L7_9CREN
metallophosphoesterase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_scaffold_2224_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14563..16044)
DNA (1482bp) protein (494aa)
DNA polymerase II small subunit (EC:2.7.7.7) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase D small subunit (DPS) n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T825_9EURY rbh
13_2_20cm_scaffold_2224_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16191..16556
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5A2_HALJB
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Dephospho-CoA kinase
13_2_20cm_scaffold_2224_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16508..18256)
DNA (1749bp) protein (583aa)
CAAX amino terminal protease family protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8V9_9EURY
CAAX amino terminal protease family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CAAX amino terminal protease family protein
13_2_20cm_scaffold_2224_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18601..18861
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T816_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_scaffold_2224_19
unknown

Not on your lists

comp(18955..19308)
DNA (354bp) protein (118aa)

This feature has no annotations

13_2_20cm_scaffold_2224_20
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(19463..19771)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH33_ACIB4
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_2224_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

19997..21016
DNA (1020bp) protein (340aa)
multi-sensor signal transduction histidine kinase Tax=RBG_16_Euryarchaeota_67_27_curated
atm:ANT_28000 putative two-component sensor histidine kinase id=1247658 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
sensor histidine kinase
13_2_20cm_scaffold_2224_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(20950..21957)
DNA (1008bp) protein (336aa)
ATP-dependent transcriptional regulator n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJM7_ACIS0
ATPase Tax=RBG_16_Euryarchaeota_67_27_curated
ATP-dependent transcriptional regulator
13_2_20cm_scaffold_2224_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

22181..24427
DNA (2247bp) protein (749aa)
Mg-chelatase subunit ChlD n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HJE5_ACIS0
Mg-chelatase subunit ChlD Tax=RBG_16_Euryarchaeota_67_27_curated
Mg-chelatase subunit ChlD
Displaying 23 items

View Taxonomy