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13_2_20cm_scaffold_21760

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_21760_1
unknown

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1..192
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_21760_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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298..1200
DNA (903bp) protein (301aa)
thioesterase superfamily protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Thioesterase superfamily protein id=3467151 bin=GWA2_Methylomirabilis_73_35 species=Vulcanisaeta moutnovskia genus=Vulcanisaeta taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioesterase superfamily protein
13_2_20cm_scaffold_21760_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1206..1958
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Probable transcriptional regulatory protein DAMO_2401 id=4284351 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_21760_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2038..2442
DNA (405bp) protein (135aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
crossover junction endodeoxyribonuclease ruvC id=4319708 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_21760_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2439..3104
DNA (666bp) protein (222aa)
DNA recombination protein RuvA domain I; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=GWA2_Rokubacteria_73_35_curated
DNA recombination protein RuvA domain I; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=14626993 bin=bin7_NC10_sister species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
DNA recombination protein RuvA domain I
13_2_20cm_scaffold_21760_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3107..4039
DNA (933bp) protein (311aa)
Holliday junction ATP-dependent DNA helicase ruvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=GWC2_Rokubacteria_70_16_curated
Holliday junction ATP-dependent DNA helicase RuvB id=4284348 bin=GWC2_Methylomirabilis_70_16 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Holliday junction DNA helicase RuvB
13_2_20cm_scaffold_21760_7
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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4036..4269
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZB9_GEODF
hypothetical protein Tax=RBG_13_Nitrospirae_43_8_curated
hypothetical protein
13_2_20cm_scaffold_21760_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4266..5396
DNA (1131bp) protein (377aa)
SpoIID/LytB domain-containing protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SpoIID/LytB domain protein id=4319706 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell division protein, SpoIID family
13_2_20cm_scaffold_21760_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5429..5728
DNA (300bp) protein (100aa)
csaA; export-related chaperone CsaA; K06878 tRNA-binding protein Tax=GWA2_Rokubacteria_73_35_curated
Export-related chaperone CsaA id=4284345 bin=GWC2_Methylomirabilis_70_16 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
csaA; export-related chaperone CsaA
13_2_20cm_scaffold_21760_10
unknown

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comp(6012..6299)
DNA (288bp) protein (96aa)

This feature has no annotations

13_2_20cm_scaffold_21760_11
unknown

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comp(6268..6708)
DNA (441bp) protein (147aa)

This feature has no annotations

13_2_20cm_scaffold_21760_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6783..7808
DNA (1026bp) protein (342aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=GWA2_Rokubacteria_73_35_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=4319702 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
13_2_20cm_scaffold_21760_13
unknown

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7817..7924
DNA (108bp) protein (36aa)

This feature has no annotations

13_2_20cm_scaffold_21760_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7921..9036
DNA (1116bp) protein (372aa)
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29) Tax=GWA2_Rokubacteria_73_35_curated
Queuine tRNA-ribosyltransferase id=4319701 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
queuine tRNA-ribosyltransferase
13_2_20cm_scaffold_21760_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9044..9283
DNA (240bp) protein (80aa)
Preprotein translocase subunit YajC id=4319700 bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=GWA2_Rokubacteria_73_35_curated
preprotein translocase, YajC subunit
Displaying 15 items

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