ggKbase home page

13_2_20cm_scaffold_2357

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2357_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

2..430
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE59_ACIB4
hypothetical protein; K09122 hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_2357_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

505..1587
DNA (1083bp) protein (361aa)
CarA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
CarA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=CARA_METKA rbh
13_2_20cm_scaffold_2357_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

1603..4836
DNA (3234bp) protein (1078aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003819C5D rbh
Carbamoyl-phosphate synthase large chain Tax=RBG_16_Euryarchaeota_67_27_curated
Carbamoyl-phosphate synthase large chain
13_2_20cm_scaffold_2357_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4861..5265
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362C1DC
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_scaffold_2357_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5303..5821
DNA (519bp) protein (173aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RBG_16_Euryarchaeota_67_27_curated
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RHI0_ARCPA
13_2_20cm_scaffold_2357_6
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5779..6162
DNA (384bp) protein (128aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RBG_16_Euryarchaeota_67_27_curated
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS3_RUBXD
13_2_20cm_scaffold_2357_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(6412..6984)
DNA (573bp) protein (191aa)
GMP synthase subunit A (EC:6.3.5.2) Tax=RBG_16_Euryarchaeota_68_13_curated
GMP synthase subunit A (EC:6.3.5.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000379ADE2
13_2_20cm_scaffold_2357_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(7056..8003)
DNA (948bp) protein (316aa)
GMP synthase subunit B (EC:6.3.5.2) Tax=RBG_16_Euryarchaeota_67_27_curated
GMP synthase subunit B (EC:6.3.5.2)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035E1670 rbh
13_2_20cm_scaffold_2357_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8000..8470)
DNA (471bp) protein (157aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBP4_9EURY
phosphoribosylaminoimidazole carboxylase catalytic subunit Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit
13_2_20cm_scaffold_2357_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8541..8855)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T463_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_2_20cm_scaffold_2357_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(8867..9100)
DNA (234bp) protein (78aa)
AsnC family transcriptional regulator n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003794C7E
transcriptional regulator Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator
13_2_20cm_scaffold_2357_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9188..10105)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036606CE
Sugar kinase, ribokinase family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Sugar kinase, ribokinase family protein
13_2_20cm_scaffold_2357_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10102..10746)
DNA (645bp) protein (215aa)
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87) Tax=RBG_16_Euryarchaeota_68_13_curated
mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX (EC:3.1.3.87)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGI6_THEPS
13_2_20cm_scaffold_2357_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10777..12015)
DNA (1239bp) protein (413aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1) Tax=RBG_16_Euryarchaeota_68_13_curated
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003803334
13_2_20cm_scaffold_2357_15
unknown

Not on your lists

comp(12059..12529)
DNA (471bp) protein (157aa)

This feature has no annotations

13_2_20cm_scaffold_2357_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12630..13493)
DNA (864bp) protein (288aa)
Transporter, CPA2 family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11RS9_CYTH3
napA; Na(+)/H(+) antiporter Tax=RBG_16_Euryarchaeota_67_27_curated
napA; Na(+)/H(+) antiporter
Displaying 16 items

View Taxonomy