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13_2_20cm_scaffold_2260

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2260_1
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..873)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220K8_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68545.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
13_2_20cm_scaffold_2260_2
unknown

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comp(875..1369)
DNA (495bp) protein (165aa)

This feature has no annotations

13_2_20cm_scaffold_2260_3
unknown

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comp(1345..1992)
DNA (648bp) protein (216aa)

This feature has no annotations

13_2_20cm_scaffold_2260_4
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(1993..2511)
DNA (519bp) protein (173aa)
putative bacterial type II secretion system protein; K12511 tight adherence protein C Tax=RBG_13_Chloroflexi_68_17_curated
atm:ANT_20670 putative bacterial type II secretion system protein; K12511 tight adherence protein C id=1246738 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative bacterial type II secretion system protein
13_2_20cm_scaffold_2260_5
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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comp(2457..2858)
DNA (402bp) protein (134aa)
Putative bacterial type II secretion system protein id=1699742 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
putative bacterial type II secretion system protein; K12511 tight adherence protein C Tax=GWC2_Chloroflexi_49_37_curated
putative bacterial type II secretion system protein
13_2_20cm_scaffold_2260_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(2861..3811)
DNA (951bp) protein (317aa)
type II secretion system protein F Tax=RBG_16_RIF_CHLX_72_14_curated
type II secretion system protein F domain; K12510 tight adherence protein B id=14630350 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
type II secretion system protein
13_2_20cm_scaffold_2260_7
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(3813..5255)
DNA (1443bp) protein (481aa)
Pilus assembly protein, ATPase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRT1_BLASD
flpF; Pilus assembly protein, ATPase
Pilus assembly protein, ATPase {ECO:0000313|EMBL:CCG02925.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens
13_2_20cm_scaffold_2260_8
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5274..6143)
DNA (870bp) protein (290aa)
Phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LL06_9ACTO
phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein
Phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein {ECO:0000313|EMBL:AGL15900.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinopl
13_2_20cm_scaffold_2260_9
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6143..7528)
DNA (1386bp) protein (462aa)
Response regulator receiver protein n=1 Tax=uncultured bacterium RepID=K2C1L7_9BACT
Response regulator receiver protein Tax=S_Thermoanaerobacterales_50_218
response regulator receiver protein
13_2_20cm_scaffold_2260_10
BJP_IG2158_Actinobacteria_57_21, Bacteria

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comp(7562..8365)
DNA (804bp) protein (268aa)
Tax=BJP_IG2158_Actinobacteria_57_21
13_2_20cm_scaffold_2260_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8368..8916)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI00034A8920
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:ACL72870.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thio
13_2_20cm_scaffold_2260_12
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(9293..9823)
DNA (531bp) protein (177aa)
Response regulator receiver n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SK03_NOCSJ
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:AHY46479.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Ru
13_2_20cm_scaffold_2260_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(9895..10263)
DNA (369bp) protein (123aa)
Histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWX6_9BACT
Histidine kinase {ECO:0000313|EMBL:EDY21296.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sensory box histidine kinase
13_2_20cm_scaffold_2260_14
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10674..11060)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5Y6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91440.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_2_20cm_scaffold_2260_15
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

11131..12486
DNA (1356bp) protein (452aa)
putative signaling protein Tax=RBG_16_Chloroflexi_64_43_curated
putative PAS/PAC sensor protein id=24531793 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative signaling protein
13_2_20cm_scaffold_2260_16
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12626..13288
DNA (663bp) protein (221aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" sou
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00036BD6F2
hypothetical protein
13_2_20cm_scaffold_2260_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13272..14489)
DNA (1218bp) protein (406aa)
major facilitator superfamily protein; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
major facilitator superfamily protein; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter id=14629309 bin=bin8_Chloro species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative major facilitator superfamily transporter
13_2_20cm_scaffold_2260_18
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14512..14841)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037D82B9
Uncharacterized protein {ECO:0000313|EMBL:KJK12792.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
Hypothetical protein
Displaying 18 items

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