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13_2_20cm_scaffold_2367

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2367_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..517
DNA (516bp) protein (172aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7I4_9PROT
Short-chain dehydrogenase {ECO:0000313|EMBL:ETR74857.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_2367_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530..1492)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PIF0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42422.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
13_2_20cm_scaffold_2367_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1728..2321
DNA (594bp) protein (198aa)
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) n=1 Tax=Rhodovulum sp. PH10 RepID=J9DTB7_9RHOB
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) {ECO:0000313|EMBL:EJW09667.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
NnrU family protein
13_2_20cm_scaffold_2367_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2333..3157
DNA (825bp) protein (275aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DEE8_9RHOB rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase
13_2_20cm_scaffold_2367_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3286..3939
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F68CC4
Uncharacterized protein {ECO:0000313|EMBL:ETR74875.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
13_2_20cm_scaffold_2367_6
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3950..4474
DNA (525bp) protein (175aa)
signal peptide protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036E2780
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL77405.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
13_2_20cm_scaffold_2367_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4533..5912
DNA (1380bp) protein (460aa)
GTP-binding protein Der n=1 Tax=Afipia birgiae RepID=UPI0002DBB3C8
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobac
GTP-binding protein
13_2_20cm_scaffold_2367_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5974..6714)
DNA (741bp) protein (247aa)
oxidoreductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003156A39 rbh
Oxidoreductase {ECO:0000313|EMBL:ETR74879.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
short-chain dehydrogenase
13_2_20cm_scaffold_2367_9
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6927..7694)
DNA (768bp) protein (256aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DDM4_9RHOB
amidophosphoribosyltransferase
13_2_20cm_scaffold_2367_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7684..8331)
DNA (648bp) protein (216aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215V0_RHOPB
13_2_20cm_scaffold_2367_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8366..9004)
DNA (639bp) protein (213aa)
colicin V synthesis protein n=1 Tax=Afipia birgiae RepID=UPI0002F2D222
Colicin V synthesis protein {ECO:0000313|EMBL:KJC55199.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobiu
colicin V production protein
13_2_20cm_scaffold_2367_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9225..10661)
DNA (1437bp) protein (479aa)
DNA repair protein radA n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QL14_NITHX rbh
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburg
13_2_20cm_scaffold_2367_13
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10741..11199)
DNA (459bp) protein (153aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=335659 species="Bacteria; Proteob
Alanine racemase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9E7_9BRAD
alr; alanine racemase
13_2_20cm_scaffold_2367_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12050..12862)
DNA (813bp) protein (271aa)
DNA helicase n=1 Tax=Afipia birgiae RepID=UPI0002EBCBE4
Replicative DNA helicase {ECO:0000313|EMBL:ETR74888.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
replicative DNA helicase
13_2_20cm_scaffold_2367_15
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12882..13481
DNA (600bp) protein (200aa)
Replicative DNA helicase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DB55_9RHIZ
Tax=GWF1_Sphingomonadales_63_6_curated
13_2_20cm_scaffold_2367_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13719..14975)
DNA (1257bp) protein (419aa)
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B52A34
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EJW09496.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" sour
cfa2; cyclopropane-fatty-acyl-phospholipid synthase
13_2_20cm_scaffold_2367_17
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15249..15407
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:CCE07098.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
Displaying 17 items

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