ggKbase home page

13_2_20cm_scaffold_2377

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2377_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3..914
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000365FB25
Origin of replication recognition protein / Cell division control protein 6 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cdc62; ORC1-type DNA replication protein
13_2_20cm_scaffold_2377_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

919..1518
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000381145C
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_2_20cm_scaffold_2377_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1512..2882)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362F589
putative single-stranded-DNA-specific exonuclease Tax=RBG_16_Euryarchaeota_67_27_curated
putative single-stranded-DNA-specific exonuclease
13_2_20cm_scaffold_2377_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists


comp(2890..3345)
DNA (456bp) protein (152aa)
30S ribosomal protein S15 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7S4_9EURY
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RBG_16_Euryarchaeota_68_13_curated
30S ribosomal protein S15
13_2_20cm_scaffold_2377_5
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(3393..4175)
DNA (783bp) protein (261aa)
methyltransferase type 11 (EC:2.1.1.-)
Methyltransferase domain protein n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=E4VN82_9HELI
SAM-dependent methyltransferase Tax=CG_Arma_02
13_2_20cm_scaffold_2377_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(4208..4870)
DNA (663bp) protein (221aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T594_9EURY
fibrillarin Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
fibrillarin
13_2_20cm_scaffold_2377_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(4870..5946)
DNA (1077bp) protein (359aa)
TPR repeat-containing protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P0J7_AZOS1
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
TPR repeat-containing protein
13_2_20cm_scaffold_2377_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(5925..6875)
DNA (951bp) protein (317aa)
TPR repeat-containing protein yrrB n=1 Tax=Microcystis aeruginosa SPC777 RepID=S3KCA1_MICAE
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
Flp pilus assembly protein TadD
13_2_20cm_scaffold_2377_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(6839..9265)
DNA (2427bp) protein (809aa)
Hypothetical membrane protein, containing TPR repeats n=1 Tax=uncultured archaeon RepID=D1JD18_9ARCH
Tetratricopeptide TPR_2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_2_20cm_scaffold_2377_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9391..9876
DNA (486bp) protein (162aa)
acetyltransferase family protein (EC:2.3.1.-)
acetyltransferase n=1 Tax=Bacillus megaterium RepID=UPI00034D8176
acetyltransferase Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_scaffold_2377_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9964..10377
DNA (414bp) protein (138aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N511_9ARCH
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
iron-sulfur cluster assembly accessory protein
13_2_20cm_scaffold_2377_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(10400..10648)
DNA (249bp) protein (83aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_2_20cm_scaffold_2377_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10731..11642)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003788A92
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cell division protein FtsZ
13_2_20cm_scaffold_2377_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11753..12967
DNA (1215bp) protein (405aa)
FAD dependent oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
FAD dependent oxidoreductase id=4973977 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FAD dependent oxidoreductase
13_2_20cm_scaffold_2377_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13048..14238
DNA (1191bp) protein (397aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_2_20cm_scaffold_2377_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

14235..15716
DNA (1482bp) protein (494aa)
SMC domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF07_RHOMR
SMC domain-containing protein; K03546 exonuclease SbcC Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
SMC domain-containing protein
13_2_20cm_scaffold_2377_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

15739..16572
DNA (834bp) protein (278aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_2_20cm_scaffold_2377_18

Not on your lists

16586..16990
DNA (405bp) protein (135aa)
Transposase, IS605 OrfB family n=1 Tax=mine drainage metagenome RepID=T0Z6K1_9ZZZZ
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EQD39777.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase, IS605 OrfB family
Displaying 18 items

View Taxonomy