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13_2_20cm_scaffold_2389

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2389_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..746
DNA (744bp) protein (248aa)
Putative hydroxlacyl-CoA dehydrogenase n=2 Tax=Bordetella bronchiseptica RepID=K0MRY2_BORBM
hydroxlacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hydroxlacyl-CoA dehydrogenase
13_2_20cm_scaffold_2389_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(842..1195)
DNA (354bp) protein (118aa)
Universal stress protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF7_GEMAT
UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
UspA domain-containing protein
13_2_20cm_scaffold_2389_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1195..2556)
DNA (1362bp) protein (454aa)
Divalent metal cation transporter MntH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF8_GEMAT rbh
mntH; putative manganese transport protein MntH; K03322 manganese transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Manganese transport protein mntH
13_2_20cm_scaffold_2389_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2579..3274)
DNA (696bp) protein (232aa)
DtxR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF6_GEMAT
DtxR family transcriptional regulator; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
DtxR family transcriptional regulator
13_2_20cm_scaffold_2389_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3416..3994)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_2389_6
unknown

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comp(3991..4296)
DNA (306bp) protein (102aa)

This feature has no annotations

13_2_20cm_scaffold_2389_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4475..5656
DNA (1182bp) protein (394aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH92_RHOM4
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
sodium:dicarboxylate symporter
13_2_20cm_scaffold_2389_8

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comp(5761..6120)
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL21493.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_2389_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6130..6837)
DNA (708bp) protein (236aa)
High-affinity nickel-transporter protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F2_GEMAT
high-affinity nickel-transporter protein
High-affinity nickel-transporter protein {ECO:0000313|EMBL:BAH37462.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aura
13_2_20cm_scaffold_2389_10
unknown

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6875..7099
DNA (225bp) protein (75aa)

This feature has no annotations

13_2_20cm_scaffold_2389_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7293..7871
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_2_20cm_scaffold_2389_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7890..8552
DNA (663bp) protein (221aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4427991 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_2_20cm_scaffold_2389_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8570..9424
DNA (855bp) protein (285aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=24461211 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_2_20cm_scaffold_2389_14

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9427..10215
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AIA11718.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF4098
13_2_20cm_scaffold_2389_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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11292..13838
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG4_GEMAT
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_2_20cm_scaffold_2389_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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13804..16083
DNA (2280bp) protein (760aa)
Helicase domain protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZT6_METCG
putative helicase Tax=RBG_16_Actinobacteria_67_10_curated
helicase domain-containing protein
13_2_20cm_scaffold_2389_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(16088..17689)
DNA (1602bp) protein (534aa)
Na+/H+ antiporter n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC95_CONWI
Na+/H+ antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:ADB53390.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (s
13_2_20cm_scaffold_2389_18
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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17707..18354
DNA (648bp) protein (216aa)
pyrophosphatase PpaX; K06019 pyrophosphatase PpaX [EC:3.6.1.1] Tax=RBG_16_Acidobacteria_68_9_curated
pyrophosphatase n=1 Tax=Bacillus coahuilensis RepID=UPI000185134C
pyrophosphatase
13_2_20cm_scaffold_2389_19
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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18376..18552
DNA (177bp) protein (59aa)
aminotransferase (EC:2.6.1.-); K00837 [EC:2.6.1.-] Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01N96_SOLUE
Displaying 19 items

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