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13_2_20cm_scaffold_2460

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2460_1
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..442
DNA (441bp) protein (147aa)
Ethanolamine:proton symporter, EAT family n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0ITB4_MYCSM
ethanolamine:proton symporter, EAT family
Ethanolamine:proton symporter, EAT family {ECO:0000313|EMBL:AGB22780.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sme
13_2_20cm_scaffold_2460_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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524..1900
DNA (1377bp) protein (459aa)
L-glutamine synthetase (EC:6.3.1.2)
L-glutamine synthetase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LW13_ACIC1
glnA; glutamine synthetase Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_2460_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1900..2667
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR80_RUBXD
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:AHY48031.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales
13_2_20cm_scaffold_2460_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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2674..3171
DNA (498bp) protein (166aa)
hypothetical protein id=1247517 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_2_20cm_scaffold_2460_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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3207..3662
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LQU3_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK51803.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulol
13_2_20cm_scaffold_2460_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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3793..4320
DNA (528bp) protein (176aa)
AzlC family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8R1_NAKMY
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:ACV79116.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099
13_2_20cm_scaffold_2460_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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4317..4616
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037CCA32
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:ACV79115.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (str
13_2_20cm_scaffold_2460_8
unknown

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4699..5028
DNA (330bp) protein (110aa)

This feature has no annotations

13_2_20cm_scaffold_2460_9
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5085..5519
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00036C2F37
Uncharacterized protein {ECO:0000313|EMBL:EST37063.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
acetyltransferase
13_2_20cm_scaffold_2460_10
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(5500..7323)
DNA (1824bp) protein (608aa)
pepF; oligopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] Tax=RBG_16_KB1_OP1_55_9_curated
Oligoendopeptidase F n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SR23_9BACT rbh
pepF; oligopeptidase F
13_2_20cm_scaffold_2460_11

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7597..8115
DNA (519bp) protein (173aa)
Lipase/esterase n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP7_9CREN
Marine sediment metagenome DNA, contig: S01H4_C03337 {ECO:0000313|EMBL:GAG55452.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
alpha/beta hydrolase
13_2_20cm_scaffold_2460_12
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8102..8794
DNA (693bp) protein (231aa)
cytochrome C biogenesis protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F00D
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KIX19456.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
ccdA; cytochrome c-type biogenesis protein CcdA
13_2_20cm_scaffold_2460_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8810..9034)
DNA (225bp) protein (75aa)
Flavin reductase-like protein n=2 Tax=Rhodococcus RepID=K8XKP2_RHOOP
Flavin reductase-like protein {ECO:0000313|EMBL:EKT81959.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
flavin reductase-like protein
13_2_20cm_scaffold_2460_14
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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9078..10382
DNA (1305bp) protein (435aa)
putative ATP-dependent helicase (EC:3.6.1.-) Tax=RBG_16_Actinobacteria_68_21_curated
putative ATP-dependent helicase (EC:3.6.1.-) id=14628638 bin=bin8_Chloro species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
lhr; DEAD/DEAH box helicase domain-containing protein
13_2_20cm_scaffold_2460_15
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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10355..11377
DNA (1023bp) protein (341aa)
DEAD/H associated domain protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y816_THEBD
DEAD/DEAH box helicase
DEAD/H associated domain protein {ECO:0000313|EMBL:ADG87835.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain AT
Displaying 15 items

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