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13_2_20cm_scaffold_2548

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2548_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..587)
DNA (585bp) protein (195aa)
Guanylate cyclase (Fragment) id=4492891 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium W5-15b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 3 adenylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_2548_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(679..1434)
DNA (756bp) protein (252aa)
Phenylacetate--CoA ligase (EC:6.2.1.30)
paaK; phenylacetate-CoA ligase Tax=GWA2_Rokubacteria_73_35_curated
Phenylacetate-CoA ligase id=4097820 bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_2548_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1902..3452)
DNA (1551bp) protein (517aa)
Benzoate-CoA ligase family n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMS4_9FIRM
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_2_20cm_scaffold_2548_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3459..3908)
DNA (450bp) protein (150aa)
enodribonuclease L-PSP n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262650F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
endoribonuclease
13_2_20cm_scaffold_2548_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3928..4413)
DNA (486bp) protein (162aa)
boxB; benzoyl-CoA oxygenase component B; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Benzoyl-CoA oxygenase component B id=4492894 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
boxB; benzoyl-CoA oxygenase component B
13_2_20cm_scaffold_2548_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4410..5297)
DNA (888bp) protein (296aa)
boxB; benzoyl-CoA oxygenase component B; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Benzoyl-CoA oxygenase component B n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRH0_THIA3
boxB; Benzoyl-CoA oxygenase component B
13_2_20cm_scaffold_2548_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5297..6967)
DNA (1671bp) protein (557aa)
hypothetical protein; K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] id=14627885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17)
13_2_20cm_scaffold_2548_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6993..7265)
DNA (273bp) protein (91aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin id=14627886 bin=bin7_NC10_sister species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_2548_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7471..8487)
DNA (1017bp) protein (339aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=14627887 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_2_20cm_scaffold_2548_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8484..10931)
DNA (2448bp) protein (816aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
4-hydroxybenzoyl-CoA reductase subunit alpha id=4915860 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_2_20cm_scaffold_2548_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10928..11404)
DNA (477bp) protein (159aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein id=14627889 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_2_20cm_scaffold_2548_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11483..12334
DNA (852bp) protein (284aa)
alpha/beta hydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative hydrolase or acyltransferase of alpha/beta superfamily id=2767977 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. WSM471 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Alpha/beta hydrolase fold protein
13_2_20cm_scaffold_2548_13
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12501..13715)
DNA (1215bp) protein (405aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003734581
ilvJ; leucine/isoleucine/valine-binding protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
hypothetical protein
13_2_20cm_scaffold_2548_14
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13777..14733)
DNA (957bp) protein (319aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J3CL28_9BURK
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
inner-membrane translocator
13_2_20cm_scaffold_2548_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14730..15611)
DNA (882bp) protein (294aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K0S8_9BURK
inner-membrane translocator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
13_2_20cm_scaffold_2548_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15616..16182)
DNA (567bp) protein (189aa)
livF; high-affinity branched-chain amino acid ABC transporter ATP binding protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_2
ABC transporter related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJV8_9PROT
ABC transporter-like protein
13_2_20cm_scaffold_2548_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16271..16765)
DNA (495bp) protein (165aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K23_RHOP5
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ07711.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
Displaying 17 items

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