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13_2_20cm_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_268_1
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2738)
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DY95_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU83612.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
LuxR family transcriptional regulator
13_2_20cm_scaffold_268_2
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3000..4481)
DNA (1482bp) protein (494aa)
Sulfotransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBW0_9SPHN rbh
Sulfotransferase {ECO:0000313|EMBL:EGD57964.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nit
sulfotransferase
13_2_20cm_scaffold_268_3
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4750..7260
DNA (2511bp) protein (837aa)
TonB-dependent receptor n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZBW1_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:EGD57963.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
TonB-dependent receptor
13_2_20cm_scaffold_268_4
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7467..7991
DNA (525bp) protein (175aa)
Tetratricopeptide repeat protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBV8_9SPHN
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EGD57966.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
hypothetical protein
13_2_20cm_scaffold_268_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7992..9998
DNA (2007bp) protein (669aa)
hydrolase n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00036AF9DD rbh
Peptidase S15 {ECO:0000313|EMBL:KAJ33455.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tu
peptidase S15 rbh
13_2_20cm_scaffold_268_6
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9995..11467
DNA (1473bp) protein (491aa)
major facilitator transporter n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746961
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
amino acid/peptide transporter
13_2_20cm_scaffold_268_7
Pseudomonas sp. GM33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11502..12509)
DNA (1008bp) protein (336aa)
Ring-hydroxylating dioxygenase, large terminal subunit n=1 Tax=Pseudomonas sp. GM33 RepID=J2R1C9_9PSED rbh
putative Rieske iron-sulfur protein
Ring-hydroxylating dioxygenase, large terminal subunit {ECO:0000313|EMBL:EJM42579.1}; TaxID=1144329 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomon
13_2_20cm_scaffold_268_8
unknown

Not on your lists

12714..12905
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_268_9
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13171..14322
DNA (1152bp) protein (384aa)
inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:AEK64146.1}; EC=3.2.2.1 {ECO:0000313|EMBL:AEK64146.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
nucleoside hydrolase n=1 Tax=Nevskia ramosa RepID=UPI0003B2EB7B rbh
13_2_20cm_scaffold_268_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14333..16714)
DNA (2382bp) protein (794aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F713_ACIC5
aldehyde dehydrogenase (NAD) family protein
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:ACO32926.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium
13_2_20cm_scaffold_268_11
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16725..17780)
DNA (1056bp) protein (352aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granuli
Deoxyribose-phosphate aldolase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NVN3_GRAMM
deoxyribose-phosphate aldolase
13_2_20cm_scaffold_268_12

Not on your lists

comp(17797..18798)
DNA (1002bp) protein (334aa)
Integral membrane protein n=1 Tax=mine drainage metagenome RepID=T1BNR3_9ZZZZ
Integral membrane protein {ECO:0000313|EMBL:EQD70233.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integral membrane protein; sugar permease
13_2_20cm_scaffold_268_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18858..19799)
DNA (942bp) protein (314aa)
Ribokinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R22_SOLUE
ribokinase
Ribokinase {ECO:0000313|EMBL:ABJ87898.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ell
13_2_20cm_scaffold_268_14
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19818..20801)
DNA (984bp) protein (328aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABZ69446.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ABZ69446.1};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; C
Transcriptional regulator, LacI family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4E6_CAUSK
13_2_20cm_scaffold_268_15
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21053..23419
DNA (2367bp) protein (789aa)
TonB-dependent receptor n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AHL8_COLFT rbh
fyuA; TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEK60057.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivor
13_2_20cm_scaffold_268_16
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23427..24737
DNA (1311bp) protein (437aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SYE0_CAUSK rbh
xanthine/uracil/vitamin C permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ABZ73307.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Cauloba
13_2_20cm_scaffold_268_17
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24761..25759
DNA (999bp) protein (333aa)
Exported nucleosidase-like glycosylase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVI0_9PROT
Exported nucleosidase-like glycosylase {ECO:0000313|EMBL:EGY02726.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" sourc
nucleoside hydrolase
13_2_20cm_scaffold_268_18
Sphingopyxis macrogoltabida, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25756..27303
DNA (1548bp) protein (516aa)
Fumonisin B1 esterase; EC=3.1.1.87;; TaxID=33050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis macrogoltabida (Sphin
Fumonisin B1 esterase n=1 Tax=Sphingopyxis macrogoltabida RepID=FUMD_SPHMC
type B carboxylesterase
13_2_20cm_scaffold_268_19
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(27294..29753)
DNA (2460bp) protein (820aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D23A7 rbh
hypothetical protein Tax=CG_Arma_01
hypothetical protein
13_2_20cm_scaffold_268_20
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29764..30297)
DNA (534bp) protein (178aa)
Adenylate cyclase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8Q5_GEODF
adenylate cyclase
Adenylate cyclase, class IV {ECO:0000313|EMBL:ACM20401.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter dalto
13_2_20cm_scaffold_268_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30648..31226
DNA (579bp) protein (193aa)
hypoxanthine phosphoribosyltransferase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B49157
Phosphoribosyltransferase {ECO:0000313|EMBL:ENY81879.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
phosphoribosyltransferase
13_2_20cm_scaffold_268_22
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31227..32240)
DNA (1014bp) protein (338aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_0196
add; adenosine deaminase (Adenosine aminohydrolase) (EC:3.5.4.4)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037B637D rbh
13_2_20cm_scaffold_268_23
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32380..32793
DNA (414bp) protein (138aa)
uraH; hydroxyisourate hydrolase (EC:3.5.2.17)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU3
5-hydroxyisourate hydrolase n=1 Tax=Nevskia ramosa RepID=UPI0003B744FF
13_2_20cm_scaffold_268_24
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32821..34335
DNA (1515bp) protein (505aa)
FAD-binding molybdopterin dehydrogenase n=1 Tax=Nevskia ramosa RepID=UPI0003B48596 rbh
xanthine dehydrogenase small subunit
Xanthine dehydrogenase, small subunit {ECO:0000313|EMBL:ADN58591.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
13_2_20cm_scaffold_268_25
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34325..36667
DNA (2343bp) protein (781aa)
xdhB; xanthine dehydrogenase (EC:1.17.1.4)
aldehyde oxidase n=1 Tax=Nevskia ramosa RepID=UPI0003B3809F rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
13_2_20cm_scaffold_268_26
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36664..37071
DNA (408bp) protein (136aa)
xanthine/CO dehydrogenase maturation protein n=1 Tax=Nevskia ramosa RepID=UPI0003B3943C
Xanthine/CO dehydrogenase maturation protein {ECO:0000313|EMBL:EIJ45618.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" so
xanthine dehydrogenase accessory protein XdhC
13_2_20cm_scaffold_268_27
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37068..37817
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036B0EA2
Xanthine dehydrogenase {ECO:0000313|EMBL:KDP89316.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-
XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
13_2_20cm_scaffold_268_28
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37814..39037
DNA (1224bp) protein (408aa)
membrane protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5F928 rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_2_20cm_scaffold_268_29
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39021..40376
DNA (1356bp) protein (452aa)
guaD; guanine deaminase (EC:3.5.4.3)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000371BE8C rbh
Guanine deaminase {ECO:0000313|EMBL:ENO85353.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DS
13_2_20cm_scaffold_268_30
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40418..41203
DNA (786bp) protein (262aa)
GntR family transcriptional regulator n=1 Tax=Nevskia ramosa RepID=UPI0003B5234A
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AGW95053.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
Displaying items 1-30 of 34 in total

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