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13_2_20cm_scaffold_2714

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2714_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(44..1918)
DNA (1875bp) protein (625aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14625912 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
13_2_20cm_scaffold_2714_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2285..3718
DNA (1434bp) protein (478aa)
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M23 id=3068131 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M23
13_2_20cm_scaffold_2714_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3760..4362
DNA (603bp) protein (201aa)
Cation efflux protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SDB4_GALCS
cation efflux protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
cation efflux protein
13_2_20cm_scaffold_2714_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4371..5033)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA8FE3
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
13_2_20cm_scaffold_2714_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5125..6264)
DNA (1140bp) protein (380aa)
Electron transfer oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Electron transfer oxidoreductase id=14627395 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Electron transfer oxidoreductase
13_2_20cm_scaffold_2714_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6261..6956)
DNA (696bp) protein (232aa)
SAM-dependent methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type 11 methyltransferase id=14627396 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
methyltransferase type 12
13_2_20cm_scaffold_2714_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6970..7995)
DNA (1026bp) protein (342aa)
Chalcone and stilbene synthase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chalcone and stilbene synthase domain protein id=14627397 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
Chalcone and stilbene synthase domain protein
13_2_20cm_scaffold_2714_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8065..8589
DNA (525bp) protein (175aa)
carbonic anhydrase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
siderophore-binding protein id=4485938 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
carbonic anhydrase
13_2_20cm_scaffold_2714_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8691..9098
DNA (408bp) protein (136aa)
Phenylacetic acid degradation-related protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215N0_RHOPB
phenylacetic acid degradation-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phenylacetic acid degradation-like protein
13_2_20cm_scaffold_2714_10
R_NC10_66_22, NC10, Bacteria

Not on your lists

9267..10880
DNA (1614bp) protein (538aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter substrate-binding protein id=14431361 bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ABC transporter substrate-binding protein
13_2_20cm_scaffold_2714_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

10882..12486
DNA (1605bp) protein (535aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter substrate-binding protein id=14431361 bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ABC transporter substrate-binding protein
13_2_20cm_scaffold_2714_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

13000..14196
DNA (1197bp) protein (399aa)
ABC transporter substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter substrate-binding protein id=14431361 bin=bin3_NC10 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
ABC transporter substrate-binding protein
13_2_20cm_scaffold_2714_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15093..15995
DNA (903bp) protein (301aa)
Diguanylate cyclase {ECO:0000313|EMBL:ETX08944.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Putative peptide ABC transporter permease protein id=3960111 bin=GWA2_Methylomirabilis_73_35 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutathione transport system permease GsiD
13_2_20cm_scaffold_2714_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16002..16784)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enoyl-CoA hydratase/isomerase family protein id=4485930 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
enoyl-CoA hydratase
13_2_20cm_scaffold_2714_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16825..17511)
DNA (687bp) protein (229aa)
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase domain protein id=4143383 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase
Displaying 15 items

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